| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0339 |
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| Symbol | |
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| ID | 4908755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 322608 |
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| End bp | 323810 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124090 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001055240 |
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| Protein GI | 126458962 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGTGACG GCTTCGTGGG CATCTCAGAG TGGTTTAGGG GGAATGTGGG AGTTATGATG
ATTTCTTGGT TTTTGTTCGC CATCTCTGGG TCTTTGACTA TGCCTTACAT GTCTAAGTAT
ATGCATATGC TGGGGGCATC CGACGTGGAG ATTGGCGTGG TGAGGTCTCT GGGGGCCTTG
GCCGTCATGG TTACGATTCT CCCTGGGGGC GTCTTAACCG ACGTGATTGG GCGGAAGAGG
GCTATTGTGG TGGGGACGTG GGGAATTAGC GTTGTACAAT TCTTCTACGC GTTGGTGCAG
GACTGGAGGC AGTTTGCCGT TGTGTACGTC GTGGATTGGG CGTTGCACTT CTACCAGCCG
GCGCTTACGG CCATTCTCTT GGATTCTCTT CCCCCTGAGA AGAGGGGTGG GGGTATGATG
CTCACCGCTG TCCTCCCCCA GATCCCCTGG CTTTTCCTCC CGCCGGTGGG CGGTTTCCTC
TTGGACTCCT TCGGCTTGTT GGGCATGAGG CTTTCCTTCC TCTTGTCTGG GGCCATTTCC
ACGGCCGTGG CTCTGCTTCG GATGAAGGCA CTCCAAGAGA CTATAACGCC TAGGCGCGCC
GTCTCTCTTA GGGAGTTGTT GGACTCTTAC GCGTTTTGGC GTGGGTTTGC CTCTCTGCCC
CCCTTCATGG CCTATGTCAC ATTTCTCGGT TTTACTAGTA GCCTAGCTGC GGTCTCTTTG
CAGACTTTTG GCGTGCTCTA TGCGACAAAC GTCATTGGGA TTGATAACAC CTCTTGGGGG
GTTATCAACA GCGCGGCGAC TGCTGTGGGC ATCCTCTTCG GCTTTGTGCT TATGCCAGTT
ATCGACAAGG CGCCGCGTGT CCACGCCCTG TTTTCCGGCC TATTGCTCAC GGCTGTTGGC
TACTTGATGT TGGGGGTTTG GCACAACGTG GTTTCGCTAG TGGCCTCGGC CATTATCACG
GGGATTGGCT TTGAGATCGC TATGTCTATT AGGAGGGCCT TGGTGGGCGA CTACATAACG
CCGGATAATA GGGGGAGGGT GATGGGGCTG ACGCTGGCGT TGGAGTATCT AGGCTCTATC
GTGGGCGGAG TGGCCACGGG GTACATCTAC GCCGCGTGGC CCCATGGGGC ATTCCTCTTC
TCAAGCGTCA TACTTTTTGG GTCTGCGATC CCCTTGTTAT TCCAAGTTTT AGCCAAGCGC
TGA
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| Protein sequence | MCDGFVGISE WFRGNVGVMM ISWFLFAISG SLTMPYMSKY MHMLGASDVE IGVVRSLGAL
AVMVTILPGG VLTDVIGRKR AIVVGTWGIS VVQFFYALVQ DWRQFAVVYV VDWALHFYQP
ALTAILLDSL PPEKRGGGMM LTAVLPQIPW LFLPPVGGFL LDSFGLLGMR LSFLLSGAIS
TAVALLRMKA LQETITPRRA VSLRELLDSY AFWRGFASLP PFMAYVTFLG FTSSLAAVSL
QTFGVLYATN VIGIDNTSWG VINSAATAVG ILFGFVLMPV IDKAPRVHAL FSGLLLTAVG
YLMLGVWHNV VSLVASAIIT GIGFEIAMSI RRALVGDYIT PDNRGRVMGL TLALEYLGSI
VGGVATGYIY AAWPHGAFLF SSVILFGSAI PLLFQVLAKR
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