Gene Pcal_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0290 
Symbol 
ID4910113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp284796 
End bp285263 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID640124042 
ProductPaREP1/PaREP8 domain-contain protein 
Protein accessionYP_001055193 
Protein GI126458915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCCCG CCGCGGTGCT TTCTAGGCTT GAGGAGGAGG CAAGGGCCAG GGGGAAGTCC 
CTGGCAGAGG TCTTATTGGA GAAACTCGCC ATAGACCCAG CCGCCAAAGC CGAGGCCTAC
CTAGAACTCC ACGAAAAGTA CCTCGCCGAG GCCGAAGAGT TGTACAAGAA GGGCGACCTC
TTGCAGGCGG GGGAGAAGTA CTGGGGGGCC GTGGCGGCTC TTTTAAACGC CATAGGCGAA
CTGCTGGGGG TAGAGCACTA CAGCCACAGA GACTACCAAC TGATCATAAC CCGCATCTAC
CGCGAGACGG GGGACATAGA CGTAGTTAGG CTTTTCCGAA TGGCCGAGGC CCTCCACGCC
AACTTCTATC ACAACTTCCT CGACCGTGAC CTCTTCGAGC GACATAGAGA GGACGCGTTG
GCCCTCGTGG AGAGGCTCAA ACGGTATATA TCGCTTAAGA GGAGGTAG
 
Protein sequence
MIPAAVLSRL EEEARARGKS LAEVLLEKLA IDPAAKAEAY LELHEKYLAE AEELYKKGDL 
LQAGEKYWGA VAALLNAIGE LLGVEHYSHR DYQLIITRIY RETGDIDVVR LFRMAEALHA
NFYHNFLDRD LFERHREDAL ALVERLKRYI SLKRR