Gene Pcal_0247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0247 
Symbol 
ID4909481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp245836 
End bp246489 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content56% 
IMG OID640123999 
Productprotein-disulfide isomerase-like protein 
Protein accessionYP_001055150 
Protein GI126458872 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.325899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTTG TTAATTTGGC AATCGTCGTT GTTGTGGTGT TAATGGTGGC GGTGGCAGTT 
CTCCTAGTGG CCCCCCTCAT CTCCCAGTCT CCTCCTCAGC CGCCGCAGGT AGTAAATCCA
GGCGGGCTTC CAATTCCGCC TTGGGCCATG CGGTTTGGCA ACGGGAGCGC GCCAGTGGTC
TTGGTGGAGT TCTTTGACCT CCTCTGCCCC TACTGTGCCT ATGCCCATGT GGAACTGGGC
CCGTTGATTA AGGAGAAGGT GCAGGAGGGC AAGCTCTACT ACATCCTCGT CGACTTCCCA
GTCCACGGAG ATGCGGCATG GGCTCTGCAC CAGCCCCTCC ACTGCGCATA TAATGAGCTG
GGCCCCTCCG CCACACTCGA CCTTGTAAAC AAGCTGTACT ACGTATGGTA CCTAGCCGCA
ATTAAGAGGG CGATCTCAGA GAGCGACGCC TTGGCCAATA TGTCAAAGAC TTTGCAGCCA
TATGCATGCC GCTTCAATGT CACACTTGCA CAAGCCATGG GCGTCTCAGA CGCCTTTGGA
AAAGTGGGCA TAAAGATTAG GGGGACGCCC ACCTTCATCA TCTACAAAAA CGGCACTCTC
ACGGTGGTGG AGGGGGCCTA CGTGGACAAG ATCAGACAGC TTTTGAGCGG CTAG
 
Protein sequence
MRLVNLAIVV VVVLMVAVAV LLVAPLISQS PPQPPQVVNP GGLPIPPWAM RFGNGSAPVV 
LVEFFDLLCP YCAYAHVELG PLIKEKVQEG KLYYILVDFP VHGDAAWALH QPLHCAYNEL
GPSATLDLVN KLYYVWYLAA IKRAISESDA LANMSKTLQP YACRFNVTLA QAMGVSDAFG
KVGIKIRGTP TFIIYKNGTL TVVEGAYVDK IRQLLSG