Gene Pcal_0241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0241 
Symbol 
ID4909424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp239302 
End bp239775 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content65% 
IMG OID640123993 
ProductNUDIX hydrolase 
Protein accessionYP_001055144 
Protein GI126458866 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.270437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTAG AGAAGAGGTG GCCAGCCGGG GGGCCCGAGT GGGCCGCGGT GGGTGTCCTG 
CTGAGAGATG GAAAGACGCT CTTGATTAAG CGCGTGCAGA GGGCGGGCGA CCCCTGGTCT
GGGCAAGTGG CCTTTCCTGG CGGGAGGTGG AAGCCAGGCG AAGACCTCCT CGGAACCGCC
GTGCGCGAGG TCCAGGAGGA GGTGGGGGTC ACGCCGAGGG GGCTAGTGGG CGTGTTAGAG
CCGCACAGCC CCCGCAACGC GCCTTGGCTG AAGGTCGTGC CGTTTATCTT CACGGAGTGG
GAGGGAGAGG TGGCGCCCAA CCCCCGCGAG GTGGCGGAGG CGAGGTGGGT GTCTAAGGCT
GAGCTCTCTG AGGAGGAGTG GATCTCGGGA TACGCCTTTG TCCACAGAGA CTGGGTTATC
TGGGGCCTCA CCTACCGAAT ATTGAAGAGA CTCATCGACT GCGGCATCCT CTAG
 
Protein sequence
MCLEKRWPAG GPEWAAVGVL LRDGKTLLIK RVQRAGDPWS GQVAFPGGRW KPGEDLLGTA 
VREVQEEVGV TPRGLVGVLE PHSPRNAPWL KVVPFIFTEW EGEVAPNPRE VAEARWVSKA
ELSEEEWISG YAFVHRDWVI WGLTYRILKR LIDCGIL