| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0223 |
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| Symbol | |
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| ID | 4908693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 224412 |
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| End bp | 225554 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640123975 |
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| Product | AAA ATPase |
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| Protein accession | YP_001055126 |
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| Protein GI | 126458848 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0653729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTTGG GGTTTAGGGG AGTAACGGCG ATATATGGGA GGCCCGGCGT TGGGAAAACC
ACCTTGGCCA TGAGGATGGC CCATGAGCGT TTGCAGAGGG GCGAGAGAGT GCTCTGGGTG
TCGCTGTACG AGGACAAGGA GACGTTTCAC AAGAACGCCT CTCTCCTGGG CTACGACTTG
TCTAAGGCGG ACTTCTGGGA CTTCGTCTTC GTCAGAACAG ACGCCATGTT AAACCAGATA
GTGTCCGCCG TGAGCCAAGA GGCCTACGGC CTAGTGGTAG TGGACTCCAT GTCGTCGGTG
TTGGAGGGCG CCCAGGCGAG GGAGTACTTA ATCAACGCCG TGTACAGAGT CTTCAAGCCC
GCGGGCGTGG ACTTGGTGGC GATAGCCGAG GAGGAGTCGG CCACCCCCTT GGACTACGTA
GTCGACAACT TGCTCCGCCT AGAGATGAGG CTGGCGAATG GGGTCACCGA GCGGCGCATG
TACGTGGTCA AGTCCCGCGG CCGCCGGGCT GGGTACTACG TGGAGTTTGA CATTCTTGAG
GGCAGGGGGC TCGTCTTCAT AGACGAGTTG CCCAAGCCGG CCGCTAGGGG CGGCTTTGAG
GCTTGGAGCG ACGCCGTCTC CCAGGCCGTG GGGCCCATTA AAGGCGGGTG CGCGTACCTC
TTCCTAGGCG GCGCGTTGAC CCCACTCTTG GCCAAGGCCG CCGCAGACTT GTCTAAGGCG
GGGCTGAAGG TGTTGTACAG AGTCCAGGGC AAAGACGCCG AGTCGGTGAG GCGCCTCGTA
GAGAAGTTTG GGGGTAAGGC TGTTGTGCAA CGCGCTGCGC CTCGGCCGCA GAGCTACTTT
GCCCACGTCA TGTCTCTCTA CGAGTCGCTC AACGAGACTG GGGCAGACGT AGTTGTGTCA
GACGGCGTGG ACTTGGAGTT CCTCCTCTAT GGTAAAAAGG CCCTTGACAT AAACCTGCAC
GAGGTCCAGG AGCTGAGGGG GCTTGGGGTA GCGTTGTTGA TTGGGATGAG CAGAGACAGG
GGGCTGAGAC ATGCGGCAGA CGCAGTGGTG TCCATACGAG GTGGGGAGGC CGTGGCTCAC
ACGCCGGAGG GTCGGCGGAT CTGCAAAGTG GAGCACGCCC CAGAGCCGGC CCTGGCCTGC
TAG
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| Protein sequence | MDLGFRGVTA IYGRPGVGKT TLAMRMAHER LQRGERVLWV SLYEDKETFH KNASLLGYDL
SKADFWDFVF VRTDAMLNQI VSAVSQEAYG LVVVDSMSSV LEGAQAREYL INAVYRVFKP
AGVDLVAIAE EESATPLDYV VDNLLRLEMR LANGVTERRM YVVKSRGRRA GYYVEFDILE
GRGLVFIDEL PKPAARGGFE AWSDAVSQAV GPIKGGCAYL FLGGALTPLL AKAAADLSKA
GLKVLYRVQG KDAESVRRLV EKFGGKAVVQ RAAPRPQSYF AHVMSLYESL NETGADVVVS
DGVDLEFLLY GKKALDINLH EVQELRGLGV ALLIGMSRDR GLRHAADAVV SIRGGEAVAH
TPEGRRICKV EHAPEPALAC
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