Gene Pcal_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0201 
Symbol 
ID4910025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp200075 
End bp200491 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content61% 
IMG OID640123953 
Productsignal-transduction protein 
Protein accessionYP_001055104 
Protein GI126458826 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAG TGTCAGACGT GCTCAAAAGG CCCCCGGTCA CTCTGCCCGA GTCTGCCACT 
ATTAGAGATG TGGCGACTGC GCTTTCTCAA AACCGCGTGG GCCTCCTCGT CCTGGTGTCA
AAGGACGACC CGAAGAGGCC TGTGGCGGTG GTGTCGGAGC GCGACGTGCT TAGGGCGGTG
GCGCAGAGGC TGGACCTAGA CGGGCCTGCT ATGTCTATTG CCAACAGGCC CATAACTGTG
TTAGACACAG ACCCGGTCTA CGTGGCGGCG GAGAAGATGA GGGCCCACAA CATAAGACAC
GTCGTAGTTG TGGACAAGGA GGGCAGGCTG GTGGGAGTCT TGTCCATAAG AGACATATGC
TTCGAGAGAG CCGCCCTGCT CGAGCTGGCG GCCCGGGAGG CGCCAGCGAC GCCTTAG
 
Protein sequence
MITVSDVLKR PPVTLPESAT IRDVATALSQ NRVGLLVLVS KDDPKRPVAV VSERDVLRAV 
AQRLDLDGPA MSIANRPITV LDTDPVYVAA EKMRAHNIRH VVVVDKEGRL VGVLSIRDIC
FERAALLELA AREAPATP