Gene Pcal_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0200 
Symbol 
ID4908175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp199355 
End bp200047 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content61% 
IMG OID640123952 
Productadenine phosphoribosyltransferase 
Protein accessionYP_001055103 
Protein GI126458825 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAGGG TAGAGGGGCT GAGGGTACAG CTAGACGCAG TTGCGTATCT GAAGTCTGTC 
AAAAAGCTTT TGGGTGTGAC GTATAGAGAG CTCTCCGCCC TCCTCGACAT TCCCGAGAGT
GTCCTCTCGC GGTACGCCAC TGGGGACATG TTGCCGTCGG TGGCCACTGC GGAGGAGATG
TTGGCCAGGC TGGAGAAGGC CTACCCAGTG CCCGAGGTGG TGAGGGCCAA GGTGAAGGTT
TACGAGTCGT ATGTGGACAT GTCCTTTGCC TACCTCCCAG AGTTTTGGCA GCTGTACGAG
GTGTACCTGG CGCGTAGGTT CGCCGGTGTG GAGGTGGACA AGGTCTTGAC CGCCGCCGTG
GATGGCATCC CGCTCGCCGT GGCCGCGGCG TCTAGGTTCG AGGCGCCGCT GGTCGTGGCT
AAGACGTATA AGGAGCCTGG GGTTGAGAAC TACGAATACA CATATCTCAG GGAGGGGAGG
CCGGCCACGT TGTATGTCCC CTCGCCGCTC TTGAGGCGGA GGGACAGAGT GCTCATCATA
GACGACATAG CTAGGACGGG CCGCACTCTT AGGGCTCTGG CGGAGCTGGC GGCCAGGGCG
GGGGCCGTGG TGGTGGGCGC CTCTGTGCTA GTGGCTAAGA GCGGCTTCAG CGCAGGCGTG
GACTTCCCCG TCGACGTGTT GTACACCTAC TAA
 
Protein sequence
MKRVEGLRVQ LDAVAYLKSV KKLLGVTYRE LSALLDIPES VLSRYATGDM LPSVATAEEM 
LARLEKAYPV PEVVRAKVKV YESYVDMSFA YLPEFWQLYE VYLARRFAGV EVDKVLTAAV
DGIPLAVAAA SRFEAPLVVA KTYKEPGVEN YEYTYLREGR PATLYVPSPL LRRRDRVLII
DDIARTGRTL RALAELAARA GAVVVGASVL VAKSGFSAGV DFPVDVLYTY