| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0159 |
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| Symbol | |
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| ID | 4910021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 152539 |
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| End bp | 153228 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640123909 |
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| Product | sugar fermentation stimulation protein |
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| Protein accession | YP_001055062 |
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| Protein GI | 126458784 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.998892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTTCC CGCTCCCCCA GCCAGACGTC TCTGCGACAT TCAAACGCCG CCTCAACAGA
TTCCTCGGCG TGGCAGAGGT GGAGGGGGAA GAGGCGCTCG TCCACATCCA CGACCCCGGC
CGCCTGGCCG AGCTGTTGTT CCCCGGCTCC ACCGTGTGGC TTAGGAAGAA GGCGGGGGGA
AAGGCCCCCT ACTACCTCCT CGCCGTGGAG TTGCCGGAGG AGCTCGTCCT CGTGGACTCA
GCGATGCACA ACAAGATAGC CACGTGGCTC GTGGAGGAGG GGCACGTGTT TAAGGGGTAC
TCCGTGGCGA AGACCGAGCC CTCCTACGGC AGAGGGCGCT TCGACCTACT ACTGAGGAGG
CCCGATGGGG GGCTGGCCTT GGTGGAGGTT AAGGGTGTCA CGCTTGAGGT GGGCGGAGTC
GCGCTTTTCC CCGACGCGCC GACGGCGAGG GGAGCTCGGC ACATGGAGGA GCTCGCGAGG
GCCGCGGCGG AGGGCTACGA GGCCCATGTC CTCTTCCTAG TGCTCAGGAG GAGGGCCCGC
CTCTTTTCGC CCAACTGGGC GCTAGACGCC AAGTTCGCAG AGGCCTTGGC CAAGGCGGCT
GACGCGGGAG TGAAAATCTC CGCGGTTAAG CTGGAGATGT TCAAGTGGGG GTTGAAATTC
GCGGGGGAGC TACCCGTTAA GCTTAGATAA
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| Protein sequence | MHFPLPQPDV SATFKRRLNR FLGVAEVEGE EALVHIHDPG RLAELLFPGS TVWLRKKAGG
KAPYYLLAVE LPEELVLVDS AMHNKIATWL VEEGHVFKGY SVAKTEPSYG RGRFDLLLRR
PDGGLALVEV KGVTLEVGGV ALFPDAPTAR GARHMEELAR AAAEGYEAHV LFLVLRRRAR
LFSPNWALDA KFAEALAKAA DAGVKISAVK LEMFKWGLKF AGELPVKLR
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