| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0153 |
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| Symbol | |
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| ID | 4909746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 145355 |
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| End bp | 147193 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640123903 |
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| Product | peptidase S49 |
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| Protein accession | YP_001055056 |
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| Protein GI | 126458778 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.908032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGCTT TGTGGGCGGT ATCTCTCCTG GCGCTCGTAC TAGCTGCGGC GGCGTTGGTC
GGCTGGTTCT CGCTACAAGT CTCCCTAGGC GAAGTTAAGG CCGAAGTCGG CAAGCTGGGC
AAGGATGTAG CCACTAATTT AAACTCCCTT GAGAAGAGAG TTGCAAACAT ATCGGCCTCT
GTGGATAAGC TCCTCAACGC GACGAGGGGG CTTGAGGAGC GTGTGTCTAA GCTTGAGGCC
AAGAAGGCGG CTGAGAAGGA GATCGTGGTA GTGCCCGTGG ATTTTGCGAT TTACGACTAT
GAGGTAGACT TCCTTGTCAA GTACGTGAAG AGGCTTGAAT TCGACGACAG AGTGGCCGGC
GTCGTGCTTC TGATAAACTC GCCTGGCGGC GCCGTGGGGG CCACTGAGCG CCTCTACAGC
ACCATCGCCG GGTTGAATAA GACTAAGTAC GCGGTGATCG CTGGGCTGGG CGCCTCGGGG
GCCTACTATA CGGCGGTGGC GGCTGAGAAG ATATACGCCA CGCCCTCCAG CTGGGTGGGA
AGCGTCGGCG TAATTGCCCT TATAGCGCCC GAGGACTACC TCGCCGAGGT GCCCGACTGG
ATTTATACCA CAGGCCCGTG GAAGTACTAC GGCAAAGACC TCCTGGCGCT GTACGACGAC
GTGGAGAAGA CTAGGGAGAA CTTCGTCAAC GCCGTGCTCA AGGGGAGGGG GGACAGGCTC
AAGGATTTGA AGGCGGTTGA GACCGCCGAG ATATTTAGAG CTGACGAGGC GCTGAGGATT
GGGCTAATAG ACGCCATAGG CGGTCTGTGG GACGCGGTGA GGGACATGGC CAAGGAGCTG
GGGCTGAAGA ACTACACAGT GGTGGACATA TATGAGAGGC ACAACGCAAC GAGGTACACC
GGCATAGTCA TACCCCTGCT GGGCGGCAAA ATAGACGCCA AGACGCTTCT GAGGCTGAGC
CCGGAGCCCA TCTTCTACAT CTACCCAGGC GCCGTGCAGT TCGACGGCTT CCCCAACGCC
ACAGTGCCGC CGGTGCAGGT GGCGGTGGAG GAGAGGCGCG GGGCGCCCTA CGTCGTCCTC
GACATGTCTC ACGGCAACGC GGTGCCGCTC CCCTTGCTGG AGCCCTTGGC GGCCGAGCTT
GTGCCAAGGG GTTACGGGAT TAGGGTGGCC AACAGCGAGT CTGAGCTAGT GAAGCTCCTC
GACAACGCCA CTGGGCTAAT AGTGGTAAAC CCCACGCAAC CCTTCAGCGA GGAGGCCCTC
TCGGCGGTGG TCAACGCCAC TAGGAGAGGC GTCAGAGTGC TCTACATGGT CGACGTGAAG
AGCCCCGTCT TTCTCTCCTA CGGGTTCATC ATAGTGTTCA CGTCGTACAA CGCGCCCCTC
TACGTGCACA ACCTGCTCGC ATACTTCAAC GCCACGGTGG TCCACAGAGC CGTCTACAAC
GACACGGCCG CGGGGGCCAA GACCTTTACG GAGAACTGGC AGTTCCTCCA TGTCACAGAC
TTCCCCAACT CCACTCTGTT TAGAGGAGTG CGCCGCCTAG TCCTCTTTGG CGCAACGCCG
GCCTTTACGC GGGCCCAGTA TAGAGTAGAC GTCCGCGGCG CCGTGCGGGG ATACGGGCCT
GGCAACTACA CAGTGGCCTT CGCCGTGGGC AATTTCACAT ACGTGGGCTC TGTGAGGTCT
TTCACGCCGT ACTTCATCCA GCTAGGCGAC AACAAGAAGT TCTTCTCCAA CTTGGTGGAG
TGGCTGGTGG AGCCGCGGCC AATAGCCCCG CCGCCTAAAA AGGCTGAAAC GACGCCCACA
TATCCATACT ACCCGGTGCC AATTCCGCCA GTCAAATAG
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| Protein sequence | MRALWAVSLL ALVLAAAALV GWFSLQVSLG EVKAEVGKLG KDVATNLNSL EKRVANISAS
VDKLLNATRG LEERVSKLEA KKAAEKEIVV VPVDFAIYDY EVDFLVKYVK RLEFDDRVAG
VVLLINSPGG AVGATERLYS TIAGLNKTKY AVIAGLGASG AYYTAVAAEK IYATPSSWVG
SVGVIALIAP EDYLAEVPDW IYTTGPWKYY GKDLLALYDD VEKTRENFVN AVLKGRGDRL
KDLKAVETAE IFRADEALRI GLIDAIGGLW DAVRDMAKEL GLKNYTVVDI YERHNATRYT
GIVIPLLGGK IDAKTLLRLS PEPIFYIYPG AVQFDGFPNA TVPPVQVAVE ERRGAPYVVL
DMSHGNAVPL PLLEPLAAEL VPRGYGIRVA NSESELVKLL DNATGLIVVN PTQPFSEEAL
SAVVNATRRG VRVLYMVDVK SPVFLSYGFI IVFTSYNAPL YVHNLLAYFN ATVVHRAVYN
DTAAGAKTFT ENWQFLHVTD FPNSTLFRGV RRLVLFGATP AFTRAQYRVD VRGAVRGYGP
GNYTVAFAVG NFTYVGSVRS FTPYFIQLGD NKKFFSNLVE WLVEPRPIAP PPKKAETTPT
YPYYPVPIPP VK
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