Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcal_0153 |
Symbol | |
ID | 4909746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum calidifontis JCM 11548 |
Kingdom | Archaea |
Replicon accession | NC_009073 |
Strand | - |
Start bp | 145355 |
End bp | 147193 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640123903 |
Product | peptidase S49 |
Protein accession | YP_001055056 |
Protein GI | 126458778 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.908032 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGGCTT TGTGGGCGGT ATCTCTCCTG GCGCTCGTAC TAGCTGCGGC GGCGTTGGTC GGCTGGTTCT CGCTACAAGT CTCCCTAGGC GAAGTTAAGG CCGAAGTCGG CAAGCTGGGC AAGGATGTAG CCACTAATTT AAACTCCCTT GAGAAGAGAG TTGCAAACAT ATCGGCCTCT GTGGATAAGC TCCTCAACGC GACGAGGGGG CTTGAGGAGC GTGTGTCTAA GCTTGAGGCC AAGAAGGCGG CTGAGAAGGA GATCGTGGTA GTGCCCGTGG ATTTTGCGAT TTACGACTAT GAGGTAGACT TCCTTGTCAA GTACGTGAAG AGGCTTGAAT TCGACGACAG AGTGGCCGGC GTCGTGCTTC TGATAAACTC GCCTGGCGGC GCCGTGGGGG CCACTGAGCG CCTCTACAGC ACCATCGCCG GGTTGAATAA GACTAAGTAC GCGGTGATCG CTGGGCTGGG CGCCTCGGGG GCCTACTATA CGGCGGTGGC GGCTGAGAAG ATATACGCCA CGCCCTCCAG CTGGGTGGGA AGCGTCGGCG TAATTGCCCT TATAGCGCCC GAGGACTACC TCGCCGAGGT GCCCGACTGG ATTTATACCA CAGGCCCGTG GAAGTACTAC GGCAAAGACC TCCTGGCGCT GTACGACGAC GTGGAGAAGA CTAGGGAGAA CTTCGTCAAC GCCGTGCTCA AGGGGAGGGG GGACAGGCTC AAGGATTTGA AGGCGGTTGA GACCGCCGAG ATATTTAGAG CTGACGAGGC GCTGAGGATT GGGCTAATAG ACGCCATAGG CGGTCTGTGG GACGCGGTGA GGGACATGGC CAAGGAGCTG GGGCTGAAGA ACTACACAGT GGTGGACATA TATGAGAGGC ACAACGCAAC GAGGTACACC GGCATAGTCA TACCCCTGCT GGGCGGCAAA ATAGACGCCA AGACGCTTCT GAGGCTGAGC CCGGAGCCCA TCTTCTACAT CTACCCAGGC GCCGTGCAGT TCGACGGCTT CCCCAACGCC ACAGTGCCGC CGGTGCAGGT GGCGGTGGAG GAGAGGCGCG GGGCGCCCTA CGTCGTCCTC GACATGTCTC ACGGCAACGC GGTGCCGCTC CCCTTGCTGG AGCCCTTGGC GGCCGAGCTT GTGCCAAGGG GTTACGGGAT TAGGGTGGCC AACAGCGAGT CTGAGCTAGT GAAGCTCCTC GACAACGCCA CTGGGCTAAT AGTGGTAAAC CCCACGCAAC CCTTCAGCGA GGAGGCCCTC TCGGCGGTGG TCAACGCCAC TAGGAGAGGC GTCAGAGTGC TCTACATGGT CGACGTGAAG AGCCCCGTCT TTCTCTCCTA CGGGTTCATC ATAGTGTTCA CGTCGTACAA CGCGCCCCTC TACGTGCACA ACCTGCTCGC ATACTTCAAC GCCACGGTGG TCCACAGAGC CGTCTACAAC GACACGGCCG CGGGGGCCAA GACCTTTACG GAGAACTGGC AGTTCCTCCA TGTCACAGAC TTCCCCAACT CCACTCTGTT TAGAGGAGTG CGCCGCCTAG TCCTCTTTGG CGCAACGCCG GCCTTTACGC GGGCCCAGTA TAGAGTAGAC GTCCGCGGCG CCGTGCGGGG ATACGGGCCT GGCAACTACA CAGTGGCCTT CGCCGTGGGC AATTTCACAT ACGTGGGCTC TGTGAGGTCT TTCACGCCGT ACTTCATCCA GCTAGGCGAC AACAAGAAGT TCTTCTCCAA CTTGGTGGAG TGGCTGGTGG AGCCGCGGCC AATAGCCCCG CCGCCTAAAA AGGCTGAAAC GACGCCCACA TATCCATACT ACCCGGTGCC AATTCCGCCA GTCAAATAG
|
Protein sequence | MRALWAVSLL ALVLAAAALV GWFSLQVSLG EVKAEVGKLG KDVATNLNSL EKRVANISAS VDKLLNATRG LEERVSKLEA KKAAEKEIVV VPVDFAIYDY EVDFLVKYVK RLEFDDRVAG VVLLINSPGG AVGATERLYS TIAGLNKTKY AVIAGLGASG AYYTAVAAEK IYATPSSWVG SVGVIALIAP EDYLAEVPDW IYTTGPWKYY GKDLLALYDD VEKTRENFVN AVLKGRGDRL KDLKAVETAE IFRADEALRI GLIDAIGGLW DAVRDMAKEL GLKNYTVVDI YERHNATRYT GIVIPLLGGK IDAKTLLRLS PEPIFYIYPG AVQFDGFPNA TVPPVQVAVE ERRGAPYVVL DMSHGNAVPL PLLEPLAAEL VPRGYGIRVA NSESELVKLL DNATGLIVVN PTQPFSEEAL SAVVNATRRG VRVLYMVDVK SPVFLSYGFI IVFTSYNAPL YVHNLLAYFN ATVVHRAVYN DTAAGAKTFT ENWQFLHVTD FPNSTLFRGV RRLVLFGATP AFTRAQYRVD VRGAVRGYGP GNYTVAFAVG NFTYVGSVRS FTPYFIQLGD NKKFFSNLVE WLVEPRPIAP PPKKAETTPT YPYYPVPIPP VK
|
| |