| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0120 |
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| Symbol | |
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| ID | 4910084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 119005 |
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| End bp | 120099 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640123871 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001055024 |
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| Protein GI | 126458746 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAACGA GGAGGAAGTT GCTCATAGCG GCTGGAGGTG CCGTGGTGGC GGTGGCGTTG
GGAGCCATAG GCTTCTCCAT GTTGCAACGG CCTAGGCTCG CCGTCTACAA CTACTCTTAC
TACATAGACA AGGATCTGTT GAAGGAGTTT GAGAGGGAAT TCGGCGTGGA GGTGATTTAC
AGAGAGTTCG AAAGCGGGGA GGAGGCCTAC TCCGCCCTGC TCCGGGGAGG AGGGGGGTAC
GACCTCGTGG TTGTCCCCGA CACGTATCTG AAAGATGTAA TAGCGGGGGG CTACGTGAGA
AAGATAGATC ACGGCAAGCT CTCCAACCTT GGCAACGTCG CGCCTGAGTT TTTTGAGAAT
CCAAACGACC GTGGGCTTCA GTACTCCATC CCCTACGCCT TCGGCATCAC GGGCTTCGCC
GTCAACTACT ACGCCATGAG GGGGGTGGAC AGGCGGCTGG ACAGCTGGTC CGACCTCTTC
GACTTCGGCC TCTTGGAAAA GATGCGCGAC AGAGTGGCCA TGTTGGAGGA GTTCATAGAG
CCCGTCATGG CGGCGAAGTA TGCCCTCGGC ATAGATCCAG ACGACTGGAG CGATGCCGCG
GTGAACAAGG TGGTAGACTT GCTCAAGCGG CAGAAGGACT ACATAAGGGG GTACTTGGGC
GTAAGCCAGA TAGTGGACGC CCTAGCCGCC GGAGAGCTGT GGGTTTCCCA GATATGGTCT
GGCGACGCCG CAACGGCCAG AGACAAATTT GTAAATTTAG CAGGAGAGGT CAATCGCGAC
AAGTTTGAAT ACGTCCTCCC AAGGCCCAAG ACGCATAGGT GGGTAGACTT CATGGTGATC
CCTCGCGACG CAAAAAACGT AGATGCCGCA TACGCCTTCA TAGACTTTGT CCTCAGGCCG
GAAAACGCGG CTAGGATAAC GCTGGCCTCT TACTACCCCA CGGCGGTCAA GAAGCAGTTA
GTGGCCAAGT ACCTCCCTGC CGACGTGTTA GAGGACCCCG CAGTGTACCC GCCCGAGGGC
GCTAACCTAA TATACTTGAA CTACACCAAG GAGCTCTTAG ATGCAGTAGA GAGGATAAGG
GCCGCTGTCA GATAA
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| Protein sequence | MVTRRKLLIA AGGAVVAVAL GAIGFSMLQR PRLAVYNYSY YIDKDLLKEF EREFGVEVIY
REFESGEEAY SALLRGGGGY DLVVVPDTYL KDVIAGGYVR KIDHGKLSNL GNVAPEFFEN
PNDRGLQYSI PYAFGITGFA VNYYAMRGVD RRLDSWSDLF DFGLLEKMRD RVAMLEEFIE
PVMAAKYALG IDPDDWSDAA VNKVVDLLKR QKDYIRGYLG VSQIVDALAA GELWVSQIWS
GDAATARDKF VNLAGEVNRD KFEYVLPRPK THRWVDFMVI PRDAKNVDAA YAFIDFVLRP
ENAARITLAS YYPTAVKKQL VAKYLPADVL EDPAVYPPEG ANLIYLNYTK ELLDAVERIR
AAVR
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