Gene Pcal_0106 details

Gene Information

• Locus tag: Pcal_0106
• ID: 4909930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 104688
• End bp: 105317
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640123857
• Product: hypothetical protein
• Protein accession: YP_001055010
• Protein GI: 126458732

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.00415315
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGGAGTTTC GGTGCGTGCC TGACTGCGCA CTCTGTTGTA GAGCTAGCCC CGTGACTGTC 
TTGCCGCATG AGGTGTATGT GCTTCAGAAG GCTGCTGGGG AGCTGGGGGT GTCTGTGGTC 
TTTACCCCGG CTTACAAGGT GGCTGACTTG AGGTCGGGGG TGCGCGTGGC GTTGAGCTAC 
TTGATGCACC TCGACGAGGA GGGTAAGTGC CCCTTCCTCG AGGGGACTAG GTGTAGGGTT 
CACGACATAT ATAAGCCGTT GACTTGCCGC TCGTTTCCCT ATCTGCCGAA GGTGGTGAAG 
TACGAGCTTG ACCCAGTTGC CAAGGAGGTG AGGGTGGACG TGCGGTTTGT TATTTCTACT 
CTGTGTCCAG TGGTTAAGAG GGACCTCTCC CCCTCTGATG TGGTTAAGAT GGCCGACGTG 
AGAGTGGCTG TGAAGTATGC GCCGAGGGAG GTGGATGTGG CTGTGTCCAC CTTGGAGAAG 
CGTATGCTTT ATGCGAGAGT CTTGTCGGAG CTTTGGCGTA GGGGGCTTGT GGAGCTCGAC 
GAGGATAAGT ACCCCTTCCT CCCAGTGGTA AACGGCTTCG CCTTTATACG TAGGTTTTAC 
CCTCAGCTCA CCTTGGAAAA ACTGTTATAG 

 

Protein sequence

MEFRCVPDCA LCCRASPVTV LPHEVYVLQK AAGELGVSVV FTPAYKVADL RSGVRVALSY 
LMHLDEEGKC PFLEGTRCRV HDIYKPLTCR SFPYLPKVVK YELDPVAKEV RVDVRFVIST 
LCPVVKRDLS PSDVVKMADV RVAVKYAPRE VDVAVSTLEK RMLYARVLSE LWRRGLVELD 
EDKYPFLPVV NGFAFIRRFY PQLTLEKLL