| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0089 |
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| Symbol | |
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| ID | 4908692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 89227 |
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| End bp | 90228 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640123842 |
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| Product | histidinol phosphate aminotransferase |
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| Protein accession | YP_001054995 |
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| Protein GI | 126458717 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00200797 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTCTGC CGCCCCCGGC AGGGGTAATC AAGCTAGACC AAAACGAGGT CCCAATACCC
CCGCCCCAGC ATGTGGTAGA GGCGGCGGCG CAGGCCTTGG CAGTGGCCAA CTGGTATCAG
CCAGCTGCGC TGTACGACGA AGTCAGAGCC CTCTACGCCG AATACGCCGG CGTGGCCCCC
GCCCACGTGT GGCTCTTCCC AGGAGCAGAC GACTTCTTCG AATACATACT CCACAGGGCA
AGGAAGGTGG CGGTTGTGTC GCCCACATAC TTCCTTTTTG AAGACCAGGC GAGGTTCCAC
GGTGTGGAGC TCCTCCAGAC CCCGCTCAGG GGGGAGGAGT TCAAGCTAGA CCTCGCCGAG
TTTCTCTCCG CGGCCAAGAG GGCAGACGCC GTGTATATAG ACAACCCAAA CAACCCCACG
GGGCAACTCC TCCTACGGCC GAAGGAAGTG GAGGAGGTCC TGGCCCTGGG GAAGCCCACG
GTGGTAGACG AGGCATACTT CGAGTTCTCC GGCGTCACCG TCGCGCAGTT GGCCGAGGCG
TGGCCGAATC TTGCAGTGGT GAGGACGATG TCTAAGGCCT TCCTCCTCGC CGGTATGAGG
GTGAGCCCAG TCATCGTAGG CGCGGGGTAC AGGCTCCACT ACAACACCGT GAGGTTCAGA
GTGTCTCTCT CCTCCCTCGC CGCGGCCCGC GCCGCATTGT ACAACAGAGG CTACGTGGGG
GAGGTGGTGA AGATTGTGAA AGAGGGCGCC GCCTACCTCC GGGAGGAGCT CGCCCGACTG
GGGATAAAGG CATGGCCCAC ATACGCCAAC TTCATCTTAG TCAAGGGCCC CCCTGGCCTC
GCCGCCGTGC TGAGGGAGTA CGGCGTGTGG GTGAGAGACG AGGAGCAGAG GCTGGGCCCC
GGCCACGTGC GAATAACAGT GGGCACGCCT GAGATAAACG CCCAGCTCGT CAGAACGCTG
AAGACTGTGC TTAAAGCTTC TCTACCTCAG CCGTCAGCTT AG
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| Protein sequence | MSLPPPAGVI KLDQNEVPIP PPQHVVEAAA QALAVANWYQ PAALYDEVRA LYAEYAGVAP
AHVWLFPGAD DFFEYILHRA RKVAVVSPTY FLFEDQARFH GVELLQTPLR GEEFKLDLAE
FLSAAKRADA VYIDNPNNPT GQLLLRPKEV EEVLALGKPT VVDEAYFEFS GVTVAQLAEA
WPNLAVVRTM SKAFLLAGMR VSPVIVGAGY RLHYNTVRFR VSLSSLAAAR AALYNRGYVG
EVVKIVKEGA AYLREELARL GIKAWPTYAN FILVKGPPGL AAVLREYGVW VRDEEQRLGP
GHVRITVGTP EINAQLVRTL KTVLKASLPQ PSA
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