| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86424 |
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| Symbol | PUF3 |
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| ID | 4850930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 472713 |
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| End bp | 476030 |
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| Gene Length | 3318 bp |
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| Protein Length | 835 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392638 |
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| Product | Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) |
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| Protein accession | XP_001387330 |
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| Protein GI | 126273891 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TGATAGTGAA CATCGTGGCG TGTCCCAGCG AAGTTACCCG TGCAAGCGTC ATAGTTAGCG
AACTTTCAGA TTCTCGTTAC TGTTCTTTTC AAGAGAATAG CGTACGACTC CAGAATCACA
GGCTAGCCTT AGATACATTA GCCTAAAGAG CCATATAACC AATAGGACTC TGTTGTTTCT
GTGAATAGAC GAATCAACAA GTCTGCCTCT ACTACATCTA CAGCGATCTT GTTGTTGAAA
CCGCCAGGGT CGTCGTTTTA TTCGTCCTGG TATTTGCTTT TCCTCGGATC ACCGCCACTA
TTATTCCGAG CCACGAGCCA TACACCATAA TACGATACTG AGAATCTATC ACAGTATACT
GTACTATCGT AGCTATTTGT CTGACATACT ATTATAGTTA CCAGTCCATC ATAACGTATC
ATTCTGCTAT AGACTATTCC ATTATTGCCG ATTCTACTAG TATACTATAT TAGTTTGATA
TGCCTTCGGA AACCATATGG TCCAGCGGCA CCGGCTCGCC CATCCAGGCC AGCTCGAGCC
AATCACAGTA CCGTAGCGTT CTCGATCTGG TTGATCCTGA AGTAGCAAAA TTGTTGTCGT
CTTCTAACGA AAGGCGTTTC TCTTTCAACG ACGGCAGTGA CATCGACTCA GGCATCTTTG
GCTTGAAACG CGGCTCATTC TCCGCCATCA CGGCTCCTGT TGGTGGAGTT TCTGGTTACC
ATAACGGTGC CAATTCTGTA GGAGGAGGGG CTTCTGGCCA GAGAATCAAC TTTGGAACTG
CTTCTATCTC AGGTGGAATT GCTTCTAGAC ATCCTCCACA AGATAGTTTT CTCCAGAAAT
TCTCATCTGT AGCTGATGCC ACCCGTGAAA TAGAGCTTTC TAATGGTCTC TCGAAGATAT
CTCTTGATAG CCATGGCCAT TCTGGTAACT CCAGAAGAAC CAGTTTCAAC AACCAGGCTG
GATCCCAGAA CGAGCCAATC AAACAGTTGT CTGAAATTGG TGTTTTGAGC TCTCCTCATG
GTTCTTTGAA TGAAAATTTA AACATGCCTG CTCCCAGATC TTCAAGACAC CAATCAATTT
CAGAGAAAAT CGACCAGTAC AACAACACTT CTCCTATCCA GGCTAGTGCT GCTTTGCTGA
TCAACTCCGA TTTGAACCTG AATCAAGATC ACCAATCAGT AAACCAACAG CAGCCTTCTA
ACGTTCCTCA CAACTTCTGG AATCCGGCAA CTGCTACATC GTTTACACCT GATTCTTCGT
ACAACTACTT CATGGACGGC TCCAGCCTTC CAGGAGGAGT TCTTGTACCT CCACCAGGAC
CACCTCAGAA CTTCAATCCG TATGGGGGAC GCAGCGGAAA CATCCCACCG ATCTCTCCCC
CTCCATTCAT GATTCCGCTG CCTCCACCGC AGTTCATGGA TCCAGGCTTG TACAATATGA
TGAACTTCCC TCCTGCCAAC AATGTAAGCA ATGCAGAATC CGAGTTGGCC AAGGAAATTA
CTGCAGCTTC TCAATCTTCT TCTTCATCTG CTCCAAATGC TGCCAGTGAT TCTGAAGAAA
AGCTTGAAGA GCACAAGGAA TCTGGGAGTG GAAGAAACGT ACATACACCA GGAATCGGCA
TTTTGGGACG CCAACAGATC CCCCTGGCTC AATTTATGTT TCACGGCTTC AATCCATACA
TGTACCAACA ATCACCCCCT CCTATGGGAA TTACTCCTCT TTCCCCAAAT CAACATCCTT
CCGAGAGCTC GATGTTTGTA GAAGGCATTC CTCCTCCTCC TGCTCCTCCA GCAGCTGCAA
AGGATTCGGC ACCAACTCCT CCGGCTTCCT CTGGTAAGCG TGGAAGAAAT GGCGCTAAGA
ACTCGAACGC TGGTAAGGGT GGAAACCACA TCTACAGATC TCCTTTACTA GAAGAAGTCC
GTTCCAATGC CAAAGGTAAG GAGTACTACT TGAAGGATAT CTATGGTCAT GCCGTTGAAT
TCACCAAAGA TCAACATGGC TCCAGATTCA TTCAACAGAA GTTACCCGAT GCCAGCGATG
AGGAGAAGGA AGTGATTTTC AACGAGATCA GAGACATTTC ATACGACTTG ATGACAGATG
TATTTGGCAA CTACGTAATA CAGAAGTACT TTGAACATGG CTCTACGACA CAGAAGAAGG
TCTTGTTGGA TTACATGATT GGTCATATCT ATGAGTTGTC GTTGCAGATG TACGGATGTA
GAGTGGTTCA GAGAGCTTTG GAAGCAATTG ACCTCGATGG TCAGATCAAG ATCATCGAAG
AGTTGAGAGA CTACATTTTA ATCTGCGCAA AAGACCAGAA TGGTAACCAT GTTATTCAAA
AGTCGATTGA AAGAATCCCT TTCGATAGAA TAAGATTCAT CTTGGACAGC TTGGATAACC
AGATCTACCA TTTATCGACT CATCCATATG GATGCCGTGT GATCCAGAGA TTGTTGGAAT
ACTCCAATGT TGAGGATCAA CAGGTGATTT TGCAAGAACT CAACAGGTTC ATCTTCTACT
TGATCCAGGA CCAGTACGGT AACTATGTGA TGCAACACAT CTTGGAAAGG GGAGAACCAG
ATGACCGCGA GGCTATCTTG AAGGTTGTTC TAGGCTCTGT AGTAAACTTC TCCAAGCACA
AGTTCGCCTC TAATGTAATT GAGAAGTGTA TCAAGTATGG TACTTTGAGC CAGAGAAAGA
GAATTCTTCG TGAAGTGATG CTTGGAAACG AGGACTTCAA TGTAGAGTTG GTTAGCGACG
AATCGCCTTT GGCTTTGATG ATGAAGGATC AGTACGCTAA CTATGTGATC CAGAAGTTAG
TGGAAGGATT CGATGCCAAT AGTGAAGAAA AGAGAATCTT GGTTGTCAAG TTGAGACAAT
ACTTGAAGCA GATTTCTTCA AAGAATACGT ATGGTAAACA TCTTGCCTCT GTCGAAAAGA
TGATCATTGT TGCTGAGACC GCTCTTATCG AAGCCGAAAA CAACTAGCTT CAAACTTGCT
GTCAACTTGT ATTATAGTTT GATGGCTATA ATTTGTCAAC TACTACTTTT TTTTGTGAAC
CAAGACGATA CTAAAATTCC TACTTATTTT TCCATCCATT AATTATTGCT ACAGTGTAAA
TACCGAGCTC CCTCTGTAAA TGTCCTTTTC AACCTATAAA TATTAAACTC TCACGTCACT
GTCTGTGTAT AGCCTTTTGA TTTACTTTCT TATATAGTCT CTTTGTTGCT GAAAACATAA
AAAGCACCGA ATTTTCGTCT TGCTCATTTT GTATATATGG AACTTTTACT TGTTAGATAT
ACGAAAACTT GCTTTTTC
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| Protein sequence | MPSETIWSSG TGSPIQASSS QSQYRSVLDL VDPEVAKLLS SSNERRFSFN DGSDIDSGIF
GLKRGSFSAI TAPVGGVSGY HNGANSVGGG ASGQRINFGT ASISGGIASR HPPQDSFLQK
FSSVADATRE IELSNGLSKI SLDSHGHSGN SRRTSFNNQA GSQNEPIKQL SEIGVLSSPH
GSLNENLNMP APRSSRHQSI SEKIDQYNNT SPIQASAALL INSDLNLNQD HQSVNQQQPS
NVPHNFWNPA TATSFTPDSS YNYFMDGSSL PGGVLVPPPG PPQNFNPYGG RSGNIPPISP
PPFMIPLPPP QFMDPGLYNM MNFPPANNVS NAESELAKEI TAASQSSSSS APNAASDSEE
KLEEHKESGS GRNVHTPGIG ILGRQQIPLA QFMFHGFNPY MYQQSPPPMG ITPLSPNQHP
SESSMFVEGI PPPPAPPAAA KDSAPTPPAS SGKRGRNGAK NSNAGKGGNH IYRSPLLEEV
RSNAKGKEYY LKDIYGHAVE FTKDQHGSRF IQQKLPDASD EEKEVIFNEI RDISYDLMTD
VFGNYVIQKY FEHGSTTQKK VLLDYMIGHI YELSLQMYGC RVVQRALEAI DLDGQIKIIE
ELRDYILICA KDQNGNHVIQ KSIERIPFDR IRFILDSLDN QIYHLSTHPY GCRVIQRLLE
YSNVEDQQVI LQELNRFIFY LIQDQYGNYV MQHILERGEP DDREAILKVV LGSVVNFSKH
KFASNVIEKC IKYGTLSQRK RILREVMLGN EDFNVELVSD ESPLALMMKD QYANYVIQKL
VEGFDANSEE KRILVVKLRQ YLKQISSKNT YGKHLASVEK MIIVAETALI EAENN
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