| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86231 |
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| Symbol | LIP12 |
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| ID | 4851394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1702599 |
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| End bp | 1703864 |
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| Gene Length | 1266 bp |
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| Protein Length | 398 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 640393102 |
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| Product | Lipoic acid synthetase, mitochondrial precursor (Lip-syn) (Lipoate synthase) |
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| Protein accession | XP_001387968 |
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| Protein GI | 126274478 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGC TCAGGGTACA CAACACACGC GTCGTATCGA GGTCCTTAAC CGTGTGGACG
CGTCCCTCAC CTACGCTTAC TCTTTCCAGA AGTCTAGCCA CAGAGTCAGA TGCGCTAGAC
AAACCCAAGA CAAGAAGAAG AAAGACGGTC TTCACGGATG CCCTCAATTC TGGCCCTTCA
TTCGACGACT TCGTCAGTGG TAAAGCATCC GAAATCATGG ATCCTCTAGA AGCAGCCAGA
AAAGACCCCA ATCAACGTCT TCCACTGTGG TTGAAAGTTC CCATCCCAAA AGGGAAATCG
TACCACAACG TGAAGAAGGA TGTCCGGGAG TTGAAGTTGG CGACAGTTTG CGAGGAAGCG
AAGTGTCCCA ACATCGGCGA GTGCTGGGGT GGGAAAAAGT CCGAAGCCAC AGCTACCATC
ATGTTGTTGG GTGACACTTG TACTCGAGGA TGTAGATTCT GCCTGGTGAA GACTAACAGA
AATCCTGCCA AGCCGGACCC CATGGAACCG GAAAATACAG CTGAGGCCAT CAGCCGATGG
GGATTGGGAT ACGTGGTGCT TACCACTGTC GACAGAGATG ACTTAGCGGA CGGTGGAGCA
CATCATTTGG CAGAGACTGT CATGAAAATC AAGCAGAAAG CTCCACAAAT TCTTGTTGAA
GTGTTGGGTG GTGATTTCCG CGGTGATTTG GACATGGCCA CTGTGTTGGC CAAGTCAGGA
TTGGATGTAT ATGCCCATAA TTTGGAGACT GTAGAAGCTT TGACTCCATT TGTCAGAGAC
CGTAGAGCCA CATATAGACA GTCCTTGTCT GTGTTACAGA GGGCTAAAGA GACCAAATCT
TCCTTGGTGA CAAAGACGTC GCTTATGTTA GGTTTGGGCG AGACTGACGA ACAGATCTTG
CAAACATTGA AGGATTTGCG TGAGATCAAC TGTGACGTCG TGACTTTTGG ACAGTACATG
AGACCAACCA AGAGACACAT GAAGGTGGTC GAGTACGTAA CACCAGAGAA GTTTGACTAC
TGGAGGGACA CAGCATTGGA GATGGGCTTC TTGTATGTGG CCAGTGGTCC GTTGGTCAGG
TCTTCGTACA AGGCTGGAGA AGCTTTTATT GAGAATGTGA TCAGAAAGAG AAGACACAAT
GTAGGTGAGG CTCCTCGGTT GGCCCAGGAG ATCCAGCCCA AGATTTTCAG AGAATAGTCA
TGTATTTAGC ACAAGGGAAA GGGTTGTAGA TAAGTATGAT AACTATATAA TAGACGCAAC
TATAAG
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| Protein sequence | MIALRVHNTR VVSRSLTVWT RPSPTLTLSR SLATESDALD KPKTRRRKTV FTDALNSGPS
FDDFVSGKAS EIMDPLEAAR KDPNQRLPLW LKVPIPKGKS YHNVKKDVRE LKLATVCEEA
KCPNIGECWG GKKSEATATI MLLGDTCTRG CRFCLVKTNR NPAKPDPMEP ENTAEAISRW
GLGYVVLTTV DRDDLADGGA HHLAETVMKI KQKAPQILVE VLGGDFRGDL DMATVLAKSG
LDVYAHNLET VEALTPFVRD RRATYRQSLS VLQRAKETKS SLVTKTSLML GLGETDEQIL
QTLKDLREIN CDVVTFGQYM RPTKRHMKVV EYVTPEKFDY WRDTALEMGF LYVASGPLVR
SSYKAGEAFI ENVIRKRRHN VGEAPRLAQE IQPKIFRE
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