| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86170 |
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| Symbol | LYS1 |
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| ID | 4850925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 462429 |
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| End bp | 463742 |
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| Gene Length | 1314 bp |
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| Protein Length | 371 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392633 |
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| Product | Saccharopine dehydrogenase [NAD+, L-lysine-forming] (Lysine--2-oxoglutarate reductase) (SDH) |
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| Protein accession | XP_001387327 |
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| Protein GI | 126273886 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ACAAAACACT TACAATGTCT ACCCCTGTGA TTTTACACTT GAGAGCCGAG ACTAAGCCTT
TGGAGCACAG AGCTGCTTTG ACCCCTACCA CTACCAAGCA GTTGATCGAT GCTGGTTTCA
AGATCTTTGT GGAAAAGAGT TCTCAGTCCA CTTTTGCCAT TGAAGAGTAC GAACAGGCAG
GAGCTACTAT TGTTCCTGAA GGATCGTGGA AGGAAGCACC TAAGGACAGA ATCATCATTG
GATTGAAGGA ATTGCCCGAA GACGAAACTT TCCCATTGGT ACACGAACAT ATCCAGTTTG
CCCATTGCTA CAAGGACCAA GGTGGGTGGA AGGATGTTTT GAGCAGATTC CCAGCTGGAA
ACGGAACTTT GTACGACTTG GAGTTCTTGG AAAACGACAC CGGAAGAAGA GTTGCAGCTT
TTGGCTTCTA CGCTGGTTTT GCTGGAGCAG CCATTGGTGT AAGAGACTGG GCCTTCAAGC
AACTCCATCC TGACTCTGAG AACTTGGGAG GTTTGACTCC TTACCCCAAT GAAGACGGGT
TGATTGCTGA CGTCAAGAAG GACTTGGAAG CAGCATTGCA AAAGAATGGA GGCCAATATC
CTACTACCTT GGTGATTGGT GCTTTGGGCA GATGTGGTTC TGGAGCCATA GACTTGTTCA
GAAAGGTCGG AATTCCAGAA GAGAACATCA CTAAGTGGGA TATCCAAGAA ACTGCTAAGG
GCGGTCCATT CAAGGAAATC GTAGAGTCCG ACATCTTTGT CAATTGTATC TACTTGTCTC
AACCAATTCC TCCTTTCATC GATTACTCCA GTTTGAATGT TCCAGACAGA AAGTTGAGAA
TCATCGTCGA TGTCTCGGCC GATACCACCA ATCCACACAA CCCTATCCCA GTGTATTCCA
TTGCTACGGT GTTTAACGAT CCTACAGTAG TTGTTGAAAC TACTGCTGGG CCAAAGTTGT
CTGTCTGTTC TATTGACCAC TTGCCATCTT TGCTTCCAAG AGAAGCCTCT GAGTTCTTCT
CTAGAGACTT GTTGCCTTCC TTGTTGCAAT TGCCAGAAAG ACAAACTGCT CCAGTATGGA
CCAGAGCCAA GGCTTTGTTC GACAAGCACG TAGCCAGATT GTCTGAGTAA GCTATTTCTA
AAAGAATATT ATTTTCAGAA AATGAAACAA ATCTCATTTT TTCGAATTGT CTGAGTAAGC
TTCGCTTGAC TTAGATCTTC AATTCTCAAT TCTACGACTT TTGCTCCCAT TAATTTTATT
ACTTTATATA GTATGTATAG CAGGGTAAAT CTATAATACA TTATCTACTT CTCT
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| Protein sequence | MSTPVILHLR AETKPLEHRA ALTPTTTKQL IDAGFKIFVE KSSQSTFAIE EYEQAGATIV
PEGSWKEAPK DRIIIGLKEL PEDETFPLVH EHIQFAHCYK DQGGWKDVLS RFPAGNGTLY
DLEFLENDTG RRVAAFGFYA GFAGAAIGVR DWAFKQLHPD SENLGGLTPY PNEDGLIADV
KKDLEAALQK NGGQYPTTLV IGALGRCGSG AIDLFRKVGI PEENITKWDI QETAKGGPFK
EIVESDIFVN CIYLSQPIPP FIDYSSLNVP DRKLRIIVDV SADTTNPHNP IPVYSIATVF
NDPTVVVETT AGPKLSVCSI DHLPSLLPRE ASEFFSRDLL PSLLQLPERQ TAPVWTRAKA
LFDKHVARLS E
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