| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_86016 |
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| Symbol | AFG1 |
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| ID | 4850860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 259341 |
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| End bp | 261661 |
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| Gene Length | 2321 bp |
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| Protein Length | 492 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392568 |
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| Product | ATPase |
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| Protein accession | XP_001387699 |
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| Protein GI | 126273750 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1485] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCATTTCCCG AGAAGTATAT TCATATTTCC ATCATTTTGA TATTCGGAAC CAGACGTGGT
ATATGTTTGT TTTATACTAT TCCTTATTGT TGGATGTTTG ATTTCAGTTC ATAGACACTT
TTAGCATTCA TATCGTCATA TCGTATCCAT TGCTCTTGCA AAACCAAAAA CTTTCACAGA
TATCTACAGT TATACTATTC ACATTCAACA GTCATAGAAT TTTCTACAAA ACTTTCACCA
AAACTCTTCA CCAAAATGTC TCGATTCATA ACTCCAGCCA GATGCCGGGC TATAGCGAAC
CCTCTCCTAG GCATTAGACG TTTTCATTTT TCAGTTCCAC TTCTTGTTAG AACGCCGTTG
GAAGAGTACA ACTTCAAAGT GGAGCAAGGA ACGCTACGTG ATGATCCATA CCAGCGGAAG
ATCATCTCCA CTCTTTCGAT ATTTCATGAG ATGTTGTCCA GCTACGATCC CCCCAAAGTA
GAAACTCCGG CCATCAGTGA TCTCAAGCCC AAGATAGGGA TAAGAAAGGT GTTCGGGTCG
TTCTTTGGAA AGGGTAAAAA CAACGGAAAT ACAGATGTAG CACTAGCAGA TGAGAATGCA
ATCAAAGGTA TTTATTTGTA TGGCGATGTT GGCTGTGGAA AGACCATGTT GATGGACTTG
TTTTATCTGA CAATTCCCAG CCATTTGCCC AAAAAAAGGA TCCATTTCCA CCAGTTCATG
CAACATTTGC ACAAACGGTC ACACCAGTTG AAAATCGAGC ATAACCATAA CGATCTCGAC
GTAATTCCTC TTTTGGCAGC GGAAATCGCC CAGGACTCTA CTGTGCTTTG CTTTGACGAA
TTCCAGGTCA CAGATGTAGC CGATGCTATG TTGCTCCGCA GATTGCTTAT GGCACTTCTT
AGTCCAGATC ATGGGGTTCT CTTATTTGCA ACCTCTAATA GAGCACCGGA CGATTTGTAC
TTGAACGGGA TCCAGCGTGT TTCGTTCATT CCCTGTATCC AGTTGATCAA ACGCCAATGC
CGTGTGATCT ATTTGAACTC GCCTACTGAC TACAGAAAGA TTCCTAAGCC TGTATCGTCA
GTATACTACT TCCCCAAGCC AGGTGTCAAA TGGCTTTCTA AAACTAACCA GTCTAATTGC
AAGAAACATG TGGAACAATG GTACGAGTAC TTTAATAGCG AGAATGATAA CCAAACCATC
TTGGAAAACC ATTCACTTGA AGTGTGGGGT AGATCACTAA ACGTTCCTCT CAGTTCTCCT
CCCACCGTTG CCCAGTTCAC CTTCCACGAC TTGTGTGGAA AGCCTATGGC GGCCGGAGAC
TACTTAATGC TAGCTAATTC GTACCAGTCG TTTATTGTCA CCGATATTCC GTACTTGAGC
ATCGATGTCA GAGATCAGGT GCGTAGATTC ATCACATTCT TAGACGCTGT ATACGATGCC
CACGGTCGTT TAGCAGTGAC AGCTGCTGCT CCGTTCAAGG ACTTGTTTGT AGAGCCTGAA
GACTTGCAAA AGGGTAACTA TATGCTCTAT AGAAGACAGC AGGACAAGGG TGGAGTAGAA
GAGACGTTTG AAGATGACGA GTTGGTTGTG AAACATGGGT TTGACAAGAG CATTGCTAAG
AAGGCTTCCA TGTTTGCTAA CGACGAAGAG AAGTTTGCTT TTGCTCGTGC TTTGTCGAGA
TTGCAGCAGA TGAGTACTAC GGATTGGATC GATAATGTCC GCCCATTGCA ATAGCCTCGT
GCACTCAATC ATTCGTTAAG ATACTAACGG AGACATGACT ATTAGGTTAT CCATGGTGTT
TTTATCCAAG GCTCTTAGAT GTGGAAAATT TTAAGCCTTG AATAGAAGTT CTTTATTCAT
TTGGTCCCTA GACCTTAGAT TTTTCTTGCA ATATTCGTTG TTAGGTTTTG AACTACATCA
AGTACTTGAG CATTACGGTC TTATCATGTT CTGAAGATCG TTCAATGGAT TATTAAGCCT
TGGAACCCGA GTCTACATGT CTACTCTAGA GAACTTAACT CAATTGTTTT GTTCTTGAGT
CTTAAACACT TTAGGGTATC ATGGCTTGCA TACTTTAGTC TTCATTATGA CTATTTCTAC
TTCAAATGGC TGCAATTCTC TGTACACCAT TAACCCACAA GGCATTGGCA TACATTGCCA
CGACATCTCT CTACAGAATC CCCGCAACTT CTCCATGTGG GGAACTACAT AGCCCTTAGT
TTATCTTGTA GCGAAAACAC AACCGAAAAG CTTCCAACGA ACTCTAGGTT CACCTAGCTT
TTGGGTACTA TTTATTAGTC TTGATACACA GCATTGCATC T
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| Protein sequence | MSRFITPARC RAIANPLLGI RRFHFSVPLL VRTPLEEYNF KVEQGTLRDD PYQRKIISTL
SIFHEMLSSY DPPKVETPAI SDLKPKIGIR KVFGSFFGKG KNNGNTDVAL ADENAIKGIY
LYGDVGCGKT MLMDLFYLTI PSHLPKKRIH FHQFMQHLHK RSHQLKIEHN HNDLDVIPLL
AAEIAQDSTV LCFDEFQVTD VADAMLLRRL LMALLSPDHG VLLFATSNRA PDDLYLNGIQ
RVSFIPCIQL IKRQCRVIYL NSPTDYRKIP KPVSSVYYFP KPGVKWLSKT NQSNCKKHVE
QWYEYFNSEN DNQTILENHS LEVWGRSLNV PLSSPPTVAQ FTFHDLCGKP MAAGDYLMLA
NSYQSFIVTD IPYLSIDVRD QVRRFITFLD AVYDAHGRLA VTAAAPFKDL FVEPEDLQKG
NYMLYRRQQD KGGVEETFED DELVVKHGFD KSIAKKASMF ANDEEKFAFA RALSRLQQMS
TTDWIDNVRP LQ
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