| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_85825 |
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| Symbol | |
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| ID | 4851493 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1974697 |
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| End bp | 1976121 |
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| Gene Length | 1425 bp |
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| Protein Length | 271 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393201 |
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| Product | predicted protein |
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| Protein accession | XP_001388006 |
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| Protein GI | 126274640 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.312279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTCTTGTGAT AGATACTATA GAAGAAACAG AGATGTCTGA AGCTGGTGTC AAGGTCTTTG
TAAGACCATT AAGTTTTGAA GGTATGTGAT TCGAAAGAAT GGAAGCGATG AAATTGGAAT
ATAAAGTATC AACAACATAA GTTAATTGTT ACTAAAGTGG TTTGATACAA TAATTAATAC
TTTCTAATGG AGATATGACT GTTTTATATG ATTGTATTAT GTGATTGTTC CTTGTGATTT
GCCATAAGAG TTGTCAATAT GTCATTTTGA ATTTCAATTT TATCCATGTG ATTTATAGTG
CTAGAACTAT AGATATCATA TGTATCATCG TCCATTGTAG CATCATACTA ACAACTTTAA
GTCGAAAGAG AACAACTTGA GTCTCATTTT GGAACCGCCG GTCCTATTGC CGATGTTTTG
ATCTTGAGAG GATTTGCCTA CATCACTTTC GAAAACAGCG AAGATGCCAC TCGTGCTATC
GAGACCTTCA ACGCTACTGA GTTCGATGGC CAGCAATTGC AGGTAGAAAC TGCCCGTGAA
AGACCGGAAG ATACCAGAGG CAAATACAGA GTTAAGATTA CCAACTTGCC AGACAACGCT
GCTTGGCAAG ACTTGAAGGA TTTCGTCAGA GAAAAGACTG GCTACCAGGG TTTGTTTGCT
AAGATCAACA GAGACTACGA ATCTGGTGAA GTTTCTGGTT CTTTGGAATT TGCCTCTGCT
GAAGAATTGG AAAGAGCTAT TCCATTATTG GACAAAGCTG AGTTCCAGGA TGCCGTCATT
GGTGCTGAAG AAGATACTTC TCCATTTGTT CCTCCAGCCA GAAGAGGTGG CTTCAGAGGA
GGCAGAGGTG GTTTCGACAG AGGTGGATTC AGAGGTGGCC GTGGAGGTTA CGACAGAGGT
GGATTCAGAG GTGGCCGTGG AGGTTACGAT AGAGGTGGAT TCAGAGGTGG TAGAGGTGGT
GGCTTCAGAG GCGGAAGAGG TGGATTCGAC CGTGGTGGAT TCAGAGGCGG AAGAGGTGGC
TATGACAGAG GTGACAGAGG TGACTTCAGA GGTGGAAGAG GTGGTGATTA CAACAGAGAA
GACAGAGGAG ACTCGTACAC CAGAGACAGA TCGCCAACTC GTTACTAATC TGAGAAGACT
CTTTACAGGT CTATGTGAGT CTGAAAATTC TTTCCCTTTG CTTTCCATAT TATATTGTTC
CATTCCTTTT TCATAAAAAA AGAATCGAGT TGATTAAAGA TTGAATTGTT GAATTATCAT
GAATTGTTGA ATTGTCATTG ATTGAAATGT TGAAGTTGAT TTGATGAATC GTTGAGATGA
TTTGAAGTGA TTTGATGAAG TGTTGACTAT CCTATTGTTA TTGTTTAAGT TTTTGCATCG
AGGAGAGAAC GAATTTTGTA TCAATATTCG AAATATATAC TCTGT
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| Protein sequence | MSEAGVKVFV RPLSFEVERE QLESHFGTAG PIADVLILRG FAYITFENSE DATRAIETFN
ATEFDGQQLQ VETARERPED TRGKYRVKIT NLPDNAAWQD LKDFVREKTG YQGLFAKINR
DYESGEVSGS LEFASAEELE RAIPLLDKAE FQDAVIGAEE DTSPFVPPAR RGGFRGGRGG
FDRGGFRGGR GGYDRGGFRG GRGGYDRGGF RGGRGGGFRG GRGGFDRGGF RGGRGGYDRG
DRGDFRGGRG GDYNREDRGD SYTRDRSPTR Y
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