| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81126 |
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| Symbol | |
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| ID | 4851839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2968739 |
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| End bp | 2970327 |
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| Gene Length | 1589 bp |
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| Protein Length | 435 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640393547 |
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| Product | predicted protein |
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| Protein accession | XP_001387134 |
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| Protein GI | 126275753 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3239] Fatty acid desaturase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000271264 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTTTACAAAG TCTCGAGTCT AATTCTCTCT CAGAAAAATC ATGCCTACCG TCTCTGCTGT
TTCCAGCATT TCTACTGGCG CTGACTTTGG TTCCGCTTCC ATTAAGAAGA GTGGAAACAT
CACGTCTTTG GACAACTCCG TATCTGGGCC ATCCTCCAAC TTGGTCACTA TCGATACCCA
CGGTAACGAA TTCAAGGTGC CTGATTACAC CATCAAGGAT ATTTTGTCTG CTATTCCTAA
GCACTGCTAC GAGAGATCTT TGATCAGATC CTTGGGCTAT GTTGTACGTG ATATCGCCGC
CATGGTCGCT ATTGGCTACG TTGGTCAGAA GTTCATTCCC TTGGCCAACT TAGAAGGCCA
TGAGACTGCT TCTACCGTAT TGAGAGGCTC GTTATGGATG GCATACTCCT ACGCTCTTGG
TTTGTTCGGT TTCGGCTTGT GGATCTTGGC TCACGAATGT GGCCACGGTG CATTCTCTGA
CTATCAGAAC ATCAACGACG TCATCGGCTG GGTGTTACAC TCTTACTTGA TGGTGCCTTA
CTTCTCGTGG AAGTTCTCCC ACGCCAAGCA CCATAAGGCT ACTGGTCACT TGACGAAGGA
TATGGTTTTC ATTCCTTACA CCAAGGAAGA GTACTGCGAA AACAAGGGAG TCTCTGTCAT
CTCTGAAGTT ATGGAAGAAT CACCTATCTG GACGTTATCT GTCTTGCTTT TCCAACAGTT
GGGAGGTTTA CAGACCTACT TGGCCATTAA CGCTACTGGC CAGAGATATC CTGGTTATTC
CAAGATCGGT AAGTCACACT ACGCTCCATC TTCTCCTGTA TTTGACAAAA ACCAATGGTG
GTTCATTGTG TTGTCTGACA TTGGTATTCT TGCTACTATA ACTGTTGTCT ACCAATGGTA
CAAGACCTTC GGTCTTTTCA ACATGATGGT CAACTGGTTC GTGCCTTGGT GTTGGGTTAA
CCACTGGTTG GTCTTTGTTA CCTTCTTGCA ACACACCGAC CCCACCATGC CTCACTACCG
TGCCGAGCAA TGGACTTTTG CTAGAGGTGC TGCTGCTACC ATCGATCGTG ACTTTGGTTT
TGTCGGACAA CACATTTTCC ACGACATTAT CGAAACTCAT GTCTTGCATC ACTACGTCTC
CAGAATTCCA TTCTACAACG CTAGAGAAGC CTCCGAAGCC ATCAAGAAAG TCATGGGTAA
ACACTACAGA TATGACGGTG AAAACATGTG GGTTTCCTTG TGGAAGTGCA TGAGAATGTG
TCAGTTTGTA GACGATGACA AGGAAGACGC AAAGGGTGTG TTGATGTTCA GAAACGTCAA
TGGTCTCGGT GTGAAGCCAA AGGATTAGAT TGGGTCCGTT TTATTTTGCA GCCACATGCT
CATGGTCTTG TAGCCTCGCC AATTATTTGC ACTTTTCATC CTAGTCACTC TTCCAGAGTG
CGATATCACT ATTTCTTGCA TTTAATATCT GAATTCTTAC TACATTATTT TGGGAAATTG
CATACATACG GTTACACGGT TAAAGGGCTT ACAGCCTCTT ACTTTCAGTT CTCTTCATAG
ACAATCTATA CATAGCTGTT TCTTCGCAA
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| Protein sequence | MPTVSAVSSI STGADFGSAS IKKSGNITSL DNSVSGPSSN LVTIDTHGNE FKVPDYTIKD
ILSAIPKHCY ERSLIRSLGY VVRDIAAMVA IGYVGQKFIP LANLEGHETA STVLRGSLWM
AYSYALGLFG FGLWILAHEC GHGAFSDYQN INDVIGWVLH SYLMVPYFSW KFSHAKHHKA
TGHLTKDMVF IPYTKEEYCE NKGVSVISEV MEESPIWTLS VLLFQQLGGL QTYLAINATG
QRYPGYSKIG KSHYAPSSPV FDKNQWWFIV LSDIGILATI TVVYQWYKTF GLFNMMVNWF
VPWCWVNHWL VFVTFLQHTD PTMPHYRAEQ WTFARGAAAT IDRDFGFVGQ HIFHDIIETH
VLHHYVSRIP FYNAREASEA IKKVMGKHYR YDGENMWVSL WKCMRMCQFV DDDKEDAKGV
LMFRNVNGLG VKPKD
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