| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80857 |
|---|
| Symbol | |
|---|
| ID | 4851538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2084537 |
|---|
| End bp | 2085431 |
|---|
| Gene Length | 895 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | |
|---|
| GC content | 42% |
|---|
| IMG OID | 640393246 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001387639 |
|---|
| Protein GI | 126274787 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2086] Electron transfer flavoprotein, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.259031 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | CAGAAAGGCC GCTTTATAAT TCAGAAGAAG ATGTCGTCTA AGTTGAGAAT CTTGGTTCCC
GTTAAGAGAG TCATTGACTT CGCCATAAAA CCAAGGATTA ACAAAGCCCA GACTGGAGTC
GAGACCAAAG GGGTCAAGTT CAGCATCAAT CCATTCTGTG ATATTGCCTT AGAAGAGTCT
GTTAGAATCA AAGAAGCAGA TAAAGACAAG GTGGAAAACA TCCATGTTGT TTCCGTTGGC
CCTGCAAAGG CTCAGGATGT TTTGAGAACT GCTTTGGCCA AAGGTGCCGA CAACAGTACT
TTGATTGATG TAGGAGATGA AGAGGTTGAG CCTTTAACTG TAGCCAAATT GTTGCAAAAG
GTGGTGGAAA AGGATAAATC TAACTTGGTG ATATTGGGCA AGCAAGCCAT TGACGATGAC
GCTAATCAGA CGGGTCAGAT GTTGGCTGGT TTATTGAACT GGCCACAAGC TACCAATGCT
TCCAAGATTG AAATAGATGG TGAAACCGTA ACTGTCACCA GGGAAATTGA TGGTGGTGCA
GACACTTTGC GTGCAAAGTT GCCTTTAGTC ATCACGACTG ACTTGCGATT GAACGAGCCT
AGATACGCAT CCTTACCTAA CATCATGAAG GCCAAGAAGA AGCCTTTGGA TAAGTTGAAG
CCAAGCGACT TGAATATTGA TTTAGTCAAG AGATTGGAAA CCTTGAAGGT GGTTGAACCA
CCTGTCAGAG AAGCCGGTAT CAAGGTTGAA ACTGTAGATG AACTTGTAGC CAAGTTGAAG
GACTTGAATG CTATCTAGAC TCGAAGAATA ATTATCAAAT CGATCTAGGA CTTGTTGCCT
AAGGTTCACT CCTCGTTCTT CAGAAACAAT GTACATATAC AAATTATTAT AATTC
|
|---|
| Protein sequence | MSSKLRILVP VKRVIDFAIK PRINKAQTGV ETKGVKFSIN PFCDIALEES VRIKEADKDK
VENIHVVSVG PAKAQDVLRT ALAKGADNST LIDVGDEEVE PLTVAKLLQK VVEKDKSNLV
ILGKQAIDDD ANQTGQMLAG LLNWPQATNA SKIEIDGETV TVTREIDGGA DTLRAKLPLV
ITTDLRLNEP RYASLPNIMK AKKKPLDKLK PSDLNIDLVK RLETLKVVEP PVREAGIKVE
TVDELVAKLK DLNAI
|
|---|
| |