| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80838 |
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| Symbol | |
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| ID | 4851495 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1979897 |
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| End bp | 1984121 |
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| Gene Length | 4225 bp |
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| Protein Length | 1268 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393203 |
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| Product | predicted protein |
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| Protein accession | XP_001388008 |
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| Protein GI | 126274646 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.217919 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.355381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCA CGATATTGCT GCTTCTCCTA TGGACGTTGC TGTTATGTCT GGCCACCATC
CACAAGAGTG GCTATTGTGC CATGTACGAC AATTGCGGAA AGAAGTCTGT GTTCGGTAGT
TCGCTTCCTT GCGTGGCCAA CGTCAAAGCA GTAGAACCGT CTGCGAAAAC TGCTCAATTG
CTCCACCAGA TCTGCGGGGA TGACTTTGAC ACTTCCAAAG TGTGCTGCTC AGAAGACCAG
GTGGTCAACA TGGAATCCAA CTTGAAACGA GTGGATCCCA TCATCTCATC CTGTCCAGCC
TGTAGAAAGA ACTTCTACGA CTTCTTTTGC AAGTTCACCT GTTCGCCCGA CCAGTCCACT
TTTTTGAACA TCACCAAAAC TGCAATCGCT GCCGATACCA AAAATGAGAT TGTCGCCGAA
CTTTCACAAT TTGTAGATCC TGGAACAGCC AAAGACTTCT ACAAGTCATG CGCCAACGTA
AAGTTCTCGG CAACCAACGG CTATGCCATG GACCTAATAG GCGGAGGAGC TAAGAACTAC
CTGCAATTTC TCAAGTTCTT GGGCGATGAG AAACCGCTTT TGGGTGGTTC TCCGTTCCAG
ATCAACTACA AGTATGAGTT ATCAGAAGCC GAGTCTGACC TGGGATTGAA ATTGAGACAG
GATAACATCT TTGCTTGTGA TGACGAAACT TATCGCTGTG CCTGTCCTGA TTGCTCAAAG
TCTTGCCCGA AGCTTCCTCG ATTCAAGGAC TTCAGAAAGA GATGCACGGT AGGCAAGATC
CCCTGCTTCA CGTTTTCGAT CGTAATCATC TGGATCTCTT TAATAATCTT ACTTGGAGGA
TATCACGTCT ATTTGGCCAA GTTGAAACGT TCCAGAGGGG AGGACGACTT CGACGACTTT
GATGTTACTT TGAGTCCACT TAGCTACGTC ACCGTCAAGA AGCCAATGTC GAGTTTCAGC
AATTGGCATC TCAGATTGAT CGAAAAGATC GAGAACACAT TTGCCAGCGT CGGATATTTC
TGCTCTTCTT ATCCAGGTTT AGTAATCTCT TTCAACTTGG TATTGACGCT AATATTATCC
TCTGGACTAT TCTGGCTCCA GTTTGAAACT GATCCCGTCA AGCTCTGGGT CTCTCCACAG
GAGCCAGCTC TCAAGAACAT GCAATACTTT GAATCAAGCT TTGGAGAATG GTTCAGAATC
GAACAGATAA TCGTCAGCAA TAAGAATGAC TCCGAACCCA TTTTGAACTG GAATAATATA
CGTTGGTGGT TTGAAAAGGA ACGCCAGCTC TATTCCTTGA ACGAAAACGT GTCGTTGTCT
GATATCTGCT TCAAACCACT CGGCGAAACT TGTGGCATAG AATCGTTCAC ACAGTACTTC
TACGGAGATA TCAATCAGCT TACTGAAGAT AACTGGAGAG CCAAATTGAA GAGCTGCACA
GACTCTCCAG TCAACTGCTT GCCTTCATTC CAACAGCCGT TGAAAAAGAA CATCCTATTT
GACAATGATG ACATCTTTCA AGCGAAGGCA TTCACTGTAA CATTATTGGT TAATAGCAAC
CTGAAAGATC AAACTTATAC AGAGTCTGCT AGCGCCTACG AGCATCTGCT TCAGAAATGG
GCTCAAAACT TAGAGAAAGA GAATCCACAG CTAAACATCG CTTTCAGTAC AGAAGTATCT
CTCACAGAAG AGTTGAACAA GTCTACAAAC ACCGATATCA GAATTATCGT CATTTCCTAT
TTGTGTATGT TCATCTATGC CTCTTTGGCT TTGGGAGGAA AGTTGCCTAA CAGAAGCCTT
TCTAGTCTTG TCAAGACCAG ATTTGCATTG GGATTATCTG GTATAATTAT CATCTTGCTA
TCCGTGACAT CTTCGCTAGG TTTGTTTTCT TTCTTGAGAT TGAAATCAAC CTTAATCATT
GCCGAAGTAA TTCCCTTCTT GGTTTTGGCA ATTGGTATAG ACAACATCTT CTTGATTGTT
CACGAATTGC ATGTAGTAAG CGAGACCTTA TACGATATGT CCATAGAGTT GAGAATCGCC
CAGGCTCTCA GAAACATTGG TCCTTCGTGC CTTATAAGTG CCGTTCTACA GGTGTCCATG
TTTTTCTTAG CCACCAATGT AGATATGCCT GCTGTAAAGA ACTTTGCTTA TTACAGTGCA
GTGGCAGTAT TGATCAACTT CTTGCTACAA ATGACTATGT TCATATCATT GCTAGCTCTT
GATCAGCATA GATTGGAGAA CAACCGTTTG GATTGCTTTC CTTGGATCAC AATCGAGGAC
CAGCATAACA TTCATTTACC TGAAGGTGAC CCCAACGAAG AAATCGAACA TGTGGAGTAT
AACTTCTCGA GCTTAATTAC CAAGTATTAT GCTCCATACA TCATGTCTAA GACCAACAAA
CCAAAACTTT TGACATTGTT TGTACTTTGG TTTGGAATTT CTTTGAGTTT GCTTCCAAAC
ATCAACTTTG GATTAGATCA AAGAATAGCG CTTCCCAAGG ATTCATACTT GATCAACTAC
TTTGACTCGG TGTACAAGTA TTTAAACGTA GGACCTCCTA CCTTTTTTGT GGTCAAGGAC
CTTGACGTAA CTGAGAGGGA AAATCAGCAG ATGGTGTGTG GTCGTTTCTC TGCTTGCGAC
ACTTATTCGT TAGCCAATAT TCTTGAAAAG GAATACAAGC GGGGATTCAA GTCTACCATA
AGTGAACCTG CTAGCAACTG GCTAGACGAT TTTTTTACCT GGTTGAATCC AGATTTGGAC
CAATGCTGTA GGTTTAAAAA GACTTCCGTA TTCGGGGAAC CAGAGTTCTG TGCCCCTCAT
GCTCCTGATC GACAATGTCA AACCTGTTAC GAGAATCATG ATCCACCATA TGACAGCTCT
ATGAAGGGTT TCCCCACTGA CAAGGACTTT ATGTTCTACT TTAACCATTG GATAGAAGAA
CCCAGTGATC CTTGTCCACT TGGCGGAAAG GCCCCATATT CATCTAGTAT ATCTCGTAAC
GAAAGCAAAG TGATTTCTAG TTACTTCAGA ACTTCACATT CGCCTTTGAG ATCTCAGGGA
GACTTCATTA ATGCCTACAA GAACTCACTC CGAATTGTGG ATGAGATCAA GAAGTTCATG
CCTGACTTGG ACGTCTTTGC CCATTCGCCA TTCTATGTCT TCTTTGTGCA ATATGAGAGA
ATTGTAGAGC TTACCTTCAC CATCTTGGGA CTGGCATTGC TTATCATATG GGGAATTAGC
ATTCTCTTGT TAGGCTCGTT TAGAACAGCC ACGGTGATGA TGGTGACTAT AGTATCGATT
TTGATCAACA TTGGCGGTGT TTTGTCGTTA TGGGACATCT CATTGAACGC TGTTAGTTTG
GTGAATTTGG TGATATGTGC TGGTCTAGCT GTTGAGTTCA CGGTTCATAT CACAAGAGCA
TACACTAATT GCAGTGCTTC TGTTTTTGGC AACGAGAGCG AAGATGATAT CTACAACCAG
TTCATGAGCA GTGGAGTTCA CGCTCGTAAC ATTGCCGACT TGAGCGCAAA TGTAAAGTTG
CTCAAAGCTT ACCATTCCTT GTGCACTGTA GGAGGTTCAG TTCTTGGGGG AATCACGCTC
ACTAAGATCA TCGGCATGTT TGTATTGGCA TTTACTAGGT CCAAGATCTT TGAGGTGTAC
TACTTCCGGA TGTGGTTCTC GTTGATTTTC ATTGCTGCCG TGCATGCTTT GTGTCTTTTG
CCTATTCTAC TCAGCTACTT TGGCGATGAT CACAAGACTA CGCTGAGGAT TTCTGATGAA
TCCCAGATTA CCGGGGAGAT TAGCAACGAG GCCAACGGAG CGTTCCGTCG GTACTCCGAC
TACATCGAAG AGGTAGAGAA TGTGGAAGAA TCGGAGAGTT AGTACTTCAT TTGACAAACT
GTGAGAATCG ATTGCAAATT TTAAGATTGC GAAAAATTAA AATGCCAGAG AGCAAAAGAA
AACCACATTG ATAACGCTAA GTATCAACGG CTGCGATAAG GGAGAGACGC TAGGAAAACG
TGTTACATTT TGCTGATAGT AATGGGCCAA GGTATCGTTG GTACTGATAG GGCTACAGAC
AAGCAGCAGA TGAAATTCTA GTATGCATGC TGGAACCAAA CAGCGGAACA AAATCCGTTT
TGGGCCCGTC AATGTGGAGG GCCAGCCTAG GGGTGCAGCT TAGAGCTGAT AATTAAATGT
TTAAAAGTAA GATTGGTTTA GCAAG
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| Protein sequence | MKLTILLLLL WTLLLCLATI HKSGYCAMYD NCGKKSVFGS SLPCVANVKA VEPSAKTAQL
LHQICGDDFD TSKVCCSEDQ VVNMESNLKR VDPIISSCPA CRKNFYDFFC KFTCSPDQST
FLNITKTAIA ADTKNEIVAE LSQFVDPGTA KDFYKSCANV KFSATNGYAM DLIGGGAKNY
LQFLKFLGDE KPLLGGSPFQ INYKYELSEA ESDLGLKLRQ DNIFACDDET YRCACPDCSK
SCPKLPRFKD FRKRCTVGKI PCFTFSIVII WISLIILLGG YHVYLAKLKR SRGEDDFDDF
DVTLSPLSYV TVKKPMSSFS NWHLRLIEKI ENTFASVGYF CSSYPGLVIS FNLVLTLILS
SGLFWLQFET DPVKLWVSPQ EPALKNMQYF ESSFGEWFRI EQIIVSNKND SEPILNWNNI
RWWFEKERQL YSLNENVSLS DICFKPLGET CGIESFTQYF YGDINQLTED NWRAKLKSCT
DSPVNCLPSF QQPLKKNILF DNDDIFQAKA FTVTLLVNSN LKDQTYTESA SAYEHLLQKW
AQNLEKENPQ LNIAFSTEVS LTEELNKSTN TDIRIIVISY LCMFIYASLA LGGKLPNRSL
SSLVKTRFAL GLSGIIIILL SVTSSLGLFS FLRLKSTLII AEVIPFLVLA IGIDNIFLIV
HELHVVSETL YDMSIELRIA QALRNIGPSC LISAVLQVSM FFLATNVDMP AVKNFAYYSA
VAVLINFLLQ MTMFISLLAL DQHRLENNRL DCFPWITIED QHNIHLPEGD PNEEIEHVEY
NFSSLITKYY APYIMSKTNK PKLLTLFVLW FGISLSLLPN INFGLDQRIA LPKDSYLINY
FDSVYKYLNV GPPTFFVVKD LDVTERENQQ MVCGRFSACD TYSLANILEK EYKRGFKSTI
SEPASNWLDD FFTWLNPDLD QCCRFKKTSV FGEPEFCAPH APDRQCQTCY ENHDPPYDSS
MKGFPTDKDF MFYFNHWIEE PSDPCPLGGK APYSSSISRN ESKVISSYFR TSHSPLRSQG
DFINAYKNSL RIVDEIKKFM PDLDVFAHSP FYVFFVQYER IVELTFTILG LALLIIWGIS
ILLLGSFRTA TVMMVTIVSI LINIGGVLSL WDISLNAVSL VNLVICAGLA VEFTVHITRA
YTNCNDIYNH ANVKLLKAYH SLCTVGGSVL GGITLTKIIG MFVLAFTRSK IFEVYYFRMW
FSLIFIAAVH ALCLLPILLS YFGDDHKTTL RISDESQITG EISNEANGAF RRYSDYIEEV
ENVEESES
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