| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80553 |
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| Symbol | NUP145 |
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| ID | 4850914 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 422427 |
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| End bp | 426701 |
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| Gene Length | 4275 bp |
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| Protein Length | 1348 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392622 |
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| Product | Nucleoporin NUP145 precursor (Nuclear pore protein NUP145) Contains: Nucleoporin NUP145N (N-NUP145) Nucleoporin NUP145C (C-NUP145) |
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| Protein accession | XP_001387319 |
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| Protein GI | 126273875 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGGCT CCACAAATAC AGGCAACAAT AACTGGGGGG CTTCTACCGG ATTTGCCAAG
TCGTCGTCAT TTAGCGGACT TTCTGGTGGC TCTAATAGTC TCTTTGGGAA CTCTGGTGGG
GCTTCATCAA ACACAAATTC AGCTGCTGGA ACACTTTTTG GATCAACAAA CGCCACCAAC
CCAACTTCGG GGCAGGGTTC TGCCGTTTCC GGGGGTCTCT TCGGCAACTC TAAAGTCAAC
AGTGGCAGTA CTTCCCAAGC TCTATTTGCC AAACCGGCTG GTGCAGGCGG TCTTTTTGGC
AATTCAGGTA ATGCCAGTAA TCCTCAACAG ACTGCTTCAA CGGGAATGTC GTCAGGTTTG
TTTGAGTCTT CAAAACGACA GGCTCCTTCT GGAACTTTTG GAAATCCCAC CAATAACACA
GCTACAGCAT CCGGAGGACT CTTTGGAAAC TCGGGCAATA CAGTGCCGAC ATCAGGAGGA
CTCTTTGGAA ATAGCTCTAC TAATAATGCC ATTTCTGGTG CCGGTCTTTT TGGTTCTAAT
GCTGTTGGAA GCGGAATCGG ATCAATACAG AAACAAAATC AAAACATAGG TGGAGGTCTT
TTTGGATCTT CTAATGCTAA TGTAGGTTCT AGTTTGTTTG GTGCTCCTCA GCAGCAGACT
ACTTATCAGC CTACTATAAA TACCAGTAAC CCCTATTCAT ATGATAAGGT GCTAACCAAC
CTCCAGACAA CGTTGTCGGG AATGCCGGAG TCTATAACTA ACAACCTCGT AGCAGAAGAC
GAAGCAAAAG ATACTGGAGA CAGAAAAAGG CGATTCTCAT ACTTGGAAAA GAAATCCAGC
GATAAGCCTC AATCAAGTCT ATTGGGAAAG TTAGGTAGAA CGTTCCGGGT GTTCAGAAAC
TCGGCTGCTA GTACTGGACT TTCTAGTATC AGGGGTTTGT TTACAGACTC CAACTATACG
AAGTCTAACA TAAACCAGAG CATATTGCCA AAACAGCAAG CCTCTGGAGG ACCCAAAAAT
GGAGTGTCCA AACCTTCTTT CCGTTCTTCC GTCGATTCAC GTCGTATGGG CTCTATCAAG
AAGTTGATCA TAAAATCCAA GCCATCAAAG TTCCATTTGA TAGATGCCGA CAGGGTAATC
AATACCAAGA GAGCTAGATT GGCAAATGTA ACCAACTTGG GCAACGATAT TTTGCCAGAC
AAGTACTCCA GTGATGAAGA TAGTGAAGGC GAACTGGAGC AAAACACTCA GAAGGGCTTT
TCTAGATATC CGTACAATAT CTTGAAAGAT GACGATGTAA AGAACAAGTC TAATCTGAAG
ACTATCATCG GCAAAAGTGT GGAACTTACT GAAGAAGTAG AAGAAGAAAG TTCTATAAAA
TACAACAAAG ACGGCTACTG GTCGTCTCCT TCTATTGATG AGCTCTCTTC CATGTCTTTG
GAAGAGTTAT CGTCCATAGA TAACTTCATT CTTGGAAGAA AGGGATTTGG ACAACTAGCC
TACAATTTCC CTGTGGACTT GTCTCTTACA ATGCAAAGTG CTCAGTCCAA TAGAGTACTG
TTGGAAAAAG AGCTTTTTGG CAATACCTTC CAACTTGAAA GAATGATTGT TCTTCTCTAT
ACTAATGATG CTCATAATAA GCCACCTATA GGTATGGGAC TCAATGTTCC TGCTACAGTG
ACTTTAGAAG GTGCAAAGCC CAGGGAGGGC GTTCCAGTAG GAGATTACAT CAAGCAATTG
AAGCTCCAGA AAGGTATGGA GTTTGTCACC TATGACCCCA TCACTTTTGT ATGGGTGTCC
AAAGTCAAAC ATTTCAGTGT GTGGGGTTTG ATTGAAGATG ATGGAACTGA ACTCTCTAAG
AAGTACATGG AAATGAAGAG AAAACAAGAC GAATATGAAG AAACTGCTGA GTTGGAATAC
TCCAGAGTCT ACGAGAATCG TGAGTACCTT CAGGAAATCA AGAAACAGAA GCTTCTCAAT
CAGACCATAG CTGTACCCGG TGGTTGGAAA TATGCCAATA CTACACAGCA AAGTCCGTTA
GATTTCAAGA GAAAGCTTCT TAACAATGAG ATCAACAGCC AATTGGATTT ACATAGAAAG
GAAAATGTTG TTAATGAGTT GTCACATGTC AGCGATATAA CACTTGACTC AGATGAAAAC
GACAGATCTG TCTCACCAGA CAGTATTGTG TTTGCTGAGA ATGAAGACTT GTCCGATGGT
GGAAACAACT TTGACTATTT AAAACAATTG GTGGGTAACC TCCCTGCCGA TGTTGATATG
GATGAGATCG TCAATGAGAA GGCTTATGAG CCAGAAATTG TTAACGATGC CGTATTCGAT
AGCATTCAGA TTTGGCCCAA CTTGGCTACT TCAGAAGATT GGATTGTCCA GTTGAAGTTG
GCGAATGACA TGAACAGTGC CTTGGCTCAG TCTTTTGGAG ACTCTGAAGG AGCCAAGAAA
CAAATCTCCC CTGAAGATAT CGATGCCGTC TTGTTTGCTG ATTTCAATAG AGAATCGTTA
AAGAAGGATC AAATTTCAAC TCCAAGCAGA GACAACAAAT TGGCTGTGAT TGAAGATATT
GAACCACAGG TTGATGACGA GATTTTCCCC AACAACATTT CTAGAATCCT CTATGATTTT
TTGACCAAAA CAATTATTGA AACCAGGACT AACTCTTACC CTAAAGTTGT AGAGACATCT
GGTTTGTCGT TTGTCAGTCT CATTACTAAT GATCTGGTGA AGGATGAGAA ACAACTCTTT
TCACTCGGTG CCTCACTTTT CGACAAATTG TCCACCGAGA AGTATACCGA ACTTGAACAA
AATATAGTGA ACTACTTGAA TGAAACAGGA AGGAAGAGAG CTTTCAATAT TTGGTTGAAA
GAGTACAATT CGAACGATAT TGAGATTCTC ATTAGCCAAG TTCAGTCCAA TTCCTTGGAA
CTCATTTTTG TATATGTTTG TGCTGGTGAC TTGAAGGAAG CCATCAACAT AGCCCTAGAA
TCTAACAATT CGCATTTGTC TGTTATCTTG ACCTTAACAG ACTCCAATGA TGATGCGGTG
AGGGGCATCG CTAGTCAACA ACTAAAGGCA TGGAGAGACT CTTCATCATT ACACTTGATA
CCTAGTCCTG TTGTCAAGAT CTATAAGATT TTGTCAGGCG AATTTGATGA CTTTGTCAAT
GAATTGCCCT GGAACATCAA CTTGGCTTTG AAATTATACT ATGGAGATGA AAGTGCCAAG
TTGCATGAAG TTCTTAATGA TTCACTTGAG AGATCTGATA ATGCTGCCTC TCAAGCTAGT
GAAGTTATTG ATATTTTGCA AGTTTACTGC AGTTTCCAAA CCGATGGTAA GGATAAAGCG
CTAAAGAAAT TGATCAGCTC ATCGTTGAAT AGCAAGTTGA AGTGGTTTTT CTTCAAAGTG
ATTTCTTCAG ATGTTGTCGA TACTACGTTT GATGGCATTT CCTTGTCGTT TGGGATGTAT
TTGGAGAGTG TCAAGTTGTG GAAAGAAGCA ATTTTTGTCT ACTCCCATTT GTCGGATGAC
GAACAGAGCA AAAACAAATT GAGAGATGTA GTGATTTCTA GTATCAAGAA CATTAACAGT
GACGACAAGA ATTATTTGGT CTCGGTGTTG AAGGTGCCCA CTGGTTTGCT TTCAGAAGCT
ATTGGCATCA GCAAAGGAGC TGATGGTGAC CACTGGGGTG AATGCGAAGC TTTCATAGAT
GCCCAGTTGT GGGAGAATGC ACATTTCGTG ATCATAACGA AGTTGGGTCC GCATGTGGTC
ATTTCCAAGA ACAAGAACGC AGAAAACAGC TTGCTTGAGT TGATTTCTCG CTTTCCCCAG
AAAGGTACGA TTATCTCTAC ATGGAACAGC GGGGCCGGAA TCTATGAAAA GTACATTGCC
TTGACCAGAG ATGAGAACAA CATAGAAGTG TTAAGGTTCT TGTTGTCGAA TATTCCCTTA
GCTAAGGAAA TCTCTAGCTT TGAAACCAAG AGTGCTCTCA AGATCATTTC TAGAAAGGTT
GGGGATGTTG CTATAGAAAA GAGAAGCGAT GTTGACGGTG TTGAAGGTAA GGTCCAGCAG
TTATATCTTG GTGAAAGTGA GAAGAAATAC TTTTCCGTGA GACTCCAGAC AGATAATGTA
TGAAGAGTAA AGGAATTGTA CAGTAGTATA GCATAGAACA GTAATATAGC GAAGAAAGGT
AATATAATAG TAAATATTTT GCACGAAAGT TGTGCAGCAG TCTATAACAG AATAATATTA
CGGTAGAGTA GTAGA
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| Protein sequence | MFGSTNTGNN NWGASTGFAK SSSFSGLSGG SNSLFGNSGG ASSNTNSAAG TLFGSTNATN
PTSGQGSAVS GGLFGNSKTA STGMSSGLFE SSKRQAPSGT FGNPTNNTAT ASGGLFGNSG
NTVPTSGGLF GNSSTNNAIS GAGLFGSNAV GSGIGSIQKQ NQNIGGGLFG SSNANVGSSL
FGAPQQQTTY QPTINTSNPY SYDKVLTNLQ TTLSGMPESI TNNLVAEDEA KDTGDRKRRF
SYLEKKSSDK PQSSLLGKLG RTFRVFRNSA ASTGLSSIRG LFTDSNYTKS NINQSILPKQ
QASGGPKNGV SKPSFRSSVD SRRMGSIKKL IIKSKPSKFH LIDADRVINT KRARLANVTN
LGNDILPDKY SSDEDSEGEL EQNTQKGFSR YPYNILKDDD VKNKSNLKTI IGKSVELTEE
VEEESSIKYN KDGYWSSPSI DELSSMSLEE LSSIDNFILG RKGFGQLAYN FPVDLSLTMQ
SAQSNRVLLE KELFGNTFQL ERMIVLLYTN DAHNKPPIGM GLNVPATVTL EGAKPREGVP
VGDYIKQLKL QKGMEFVTYD PITFVWVSKV KHFSVWGLIE DDGTELSKKY MEMKRKQDEY
EETAELEYSR VYENREYLQE IKKQKLLNQT IAVPGGWKYA NTTQQSPLDF KRKLLNNEIN
SQLDLHRKEN VVNELSHVSD ITLDSDENDR SVSPDSIVFA ENEDLSDGGN NFDYLKQLVG
NLPADVDMDE IVNEKAYEPE IVNDAVFDSI QIWPNLATSE DWIVQLKLAN DMNSALAQSF
GDSEGAKKQI SPEDIDAVLF ADFNRESLKK DQISTPSRDN KLAVIEDIEP QVDDEIFPNN
ISRILYDFLT KTIIETRTNS YPKVVETSGL SFVSLITNDL VKDEKQLFSL GASLFDKLST
EKYTELEQNI VNYLNETGRK RAFNIWLKEY NSNDIEILIS QVQSNSLELI FVYVCAGDLK
EAINIALESN NSHLSVILTL TDSNDDAVRG IASQQLKAWR DSSSLHLIPS PVVKIYKILS
GEFDDFVNEL PWNINLALKL YYGDESAKLH EVLNDSLERS DNAASQASEV IDILQVYCSF
QTDGKDKALK KLISSSLNSK LKWFFFKVIS SDVVDTTFDG ISLSFGMYLE SVKLWKEAIF
VYSHLSDDEQ SKNKLRDVVI SSIKNINSDD KNYLVSVLKV PTGLLSEAIG ISKGADGDHW
GECEAFIDAQ LWENAHFVII TKLGPHVVIS KNKNAENSLL ELISRFPQKG TIISTWNSGA
GIYEKYIALT RDENNIEVLR FLLSNIPLAK EISSFETKSA LKIISRKVGD VAIEKRSDVD
GVEGKVQQLY LGESEKKYFS VRLQTDNV
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