| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80515 |
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| Symbol | CUL4 |
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| ID | 4851110 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 957634 |
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| End bp | 960270 |
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| Gene Length | 2637 bp |
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| Protein Length | 783 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392818 |
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| Product | cullin, ubiquitin ligase activity |
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| Protein accession | XP_001387419 |
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| Protein GI | 126274096 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5647] Cullin, a subunit of E3 ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.205176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CGATTTGGCC ACTATGTTGG ATTTCGGAAA CTTGGAGGCG TCTTCGTCGT CTTTGTCAAC
CCGAGATGCC GGACCTTCCC ATTTGACCCC ACAATTCCAG CGCTCCTCAG ATAGTCTGGA
CACAAATACC AGCAACACCC ATAAGCGGAT AAAACCGAAC TTCGAGCCAC CTACTAAACC
ACAAGTGCTC GAGCTGTTGC AGGTAGCCAA GTCAGCGGCC GAGGAGGTGA TTGATCTTGT
TTTAGAAGGG AAGCCTTTGA AAAGGAGCTA CTATACCTAC TACAAAGACA TAGAATCCAT
CTGCAGATAC AAACATGCTG AAAAGTCAAA ATTAGCATCA CTTGTGTTTG AAAAATTGGA
CAATGCGTAC AAAGTTGTCA AACAGAAGAC TGTGGATTTG GTTTACATGA GAGATCAAGC
GCTTGAATCG AATATGGATG TAGACCAAAT CCCAGAAACT GATATTTCTG AGACATCTCG
CAATATTAGA GACAATATTT CAGACAGCGA ACCCTATAAA TGGACTAATG CGTTCTTGGC
CATTATCCAA GATTGGAAAG ATAAGCTCAG TCGATTAAGT AAACTTTTTG CCTATTTGGA
TCGAGGATAT TTACTTCCAC ATGCTACTAA GAAGACAATC TTGGAGTATG GATTAGGTGT
ATATGTAGAG GATATACTTG CTAACATGAA AGAAGACAGC AAAAACGAGA TATCCGAGTT
GGTATTGAAG AGATATCTTC TACAGCTACG ATACGATCGT GAATTGGCTG AACCAGAATA
TATCTATGCT CAATCTGATT CAGTATCTAA TTTAGGATCT GGTTCAGAAT CTGTGCTACA
CATTTATTCT GAGTCTCTGG AGGCTTTTAC GCGTACATTA ATGAGGTTGA ACTTCAACAA
CGACTATCTG CTCCACAAGA ACCTTTCAGA CGACATTGCT GAACATTACC GTAGCATCAG
TAGGAAATGG CACAACGATC CTGACTATTT GGACAGAGTA TGTTCCATTC TCAAAGGCGA
AGTAGACTTC TTTCGAGACT GTGGCCAATC ACAAGAGTTC CTCGATACTC TCTACAAGTC
ATTGAAGTTT GTGTTGATCT TTTATGACCA TTCAGAGATA TTTGTCGAGG TATTGCCTGG
CTTGTTAGAG AGCGAAAATG GCCCGAGACA GCTTCAAACG TTGTACAAGT TCTGTGAGCA
GTCGTTGAAT GACTTTGCTC TAGATTCTAT GCCAATGTTC AGAACCCAAT GGGGAGCCTA
TGTAGAGAAA AAGGTGATGG AAGTGATAGA AACGTCCAAG ACTGCGGGAT CTGGGTCCAA
TGTTCTTTCT TTGCTAGTAG ATATTTTTGT CAAGTATGAC ACTCTTTCTA ACAGTTATTT
GGATGAGAAG TTTGAGTTTG AGCTTAGAAA CTACTTCAAG AAAGGATTGA ACGATAGAAC
CAACAGTTCG TTCATTGTTT ATCAGCTTTG TAAATATTGC GACTCATACT TCAAAGGACC
ATCCAAGAAG CTGAGCTTAC CTGAGACGTT TGAGGAGTTC AAGAAAAATG TTCTTATCAT
CTTCAAAGCC ATCGAGAACA AGAGAGATTT TACGGAAATC TACCAGAAGG ACCTATCTAA
GCGACTTTTG GTAAGTAGGA ATACCAACTT CGACCATGAA AAAGAACTAG CAGACTCTCT
CCTCGAAGTC ATTGGCGAAA GTGATGAAAG TGTAGGACTC CAAGTTATGT TCAAAGACTT
AAATCAGTCT AAGGATGTTT ATTCTCTGTT GATTGAAAGT ACTGGAATTG AATTCAATCC
ATTGGTGTTG GAAAAGAAGT ATTGGCCCGA CATTCCGAAG ATGGATACAG ATATAACGCT
TCCTTCCGAG CTTCAACTTT TGCTAGATCA ATTCACCGCT AAATACACGT CGTCAGGTGA
AAGATTCAAA AGCCAGAAAT TGGACTGGTC CAACTACACA TTGCACCAGC TTTCAATTAA
TGCAGAGTTT GAAAGTGGAA CAAAAGAATT GGTTGTGAAT CTACTTCAGG CGGTTGTTAT
ATTGGTGTTT AACGACGTTA ACAGCTATAC TTTTGTCGAG CTTCAGCAAT TGACTGGTAT
GGAACCCAAA CTTCTTAAAC GAGTCTTGGG ATCCGTTTCT TCAGAGAAGT ACGCGATTCT
TTCGCGAGAT GGGGATATCT ATCTGTTCAA TTCCAAATTC ACAGATAAGT CGTCCCGAAT
CAAGATTCCA CTTTCAAAAG ATAAGGATTC GATGAAGATC TCCGCTTCTG TATCTGAGCT
GGATACAAAT CGCATTATTC TGCGAAACAG AACAGACGAG CTCAAGGGTG CCATTGTAAA
GGTTATGAAG GAGTTCAAGC AGTTGAGTGT CACAGAGTTG TTGAACAAGG CCATCGAAGG
AGTGGAAAAG AGAGGACCAG TTACTTTGAC TGAATTGAAG AAGAATATCG ATGATTTGGT
GGACAGCGAG TATTTACGCA GAGTCGACAG GGAAACGTTG GCATACATAC CGTGATACAG
ATGAATATAA TGAAGCTTTA TAAGACGAAA AGATATAAAT ATAGTGCAAA GATACTAGAA
TGGCATAAAG AACTTAGGAG AGCTCAAGCT CAAAAGAGCT ATTCTATAGG CAACGTG
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| Protein sequence | MLDFGNLEAS SSSLSTRDAG PSHLTPQFQR SSDSLDTNTS NTHKRIKPNF EPPTKPQVLE
LLQVAKSAAE EVIDLVLEGK PLKRSYYTYY KDIESICRYK HAEKSKLASL VFEKLDNAYK
VVKQKTTSRN IRDNISDSEP YKWTNAFLAI IQDWKDKLSR LSKLFAYLDR GYLLPHATKK
TILEYGLGVY VEDILANMKE DSKNEISELV LKRYLLQLRY DQSVLHIYSE SLEAFTRTLM
RLNFNNDYLL HKNLSDDIAE HYRSISRKWH NDPDYLDRVC SILKGEVDFF RDCGQSQEFL
DTLYKSLKFV LIFYDHSEIF VEVLPGLLES ENGPRQLQTL YKFCEQSLND FALDSMPMFR
TQWGAYVEKK VMEVIETSKT AGSGSNVLSL LVDIFVKYDT LSNSYLDEKF EFELRNYFKK
GLNDRTNSSF IVYQLCKYCD SYFKGPSKKL SLPETFEEFK KNVLIIFKAI ENKRDFTEIY
QKDLSKRLLV SRNTNFDHEK ELADSLLEVI GESDESVGLQ VMFKDLNQSK DVYSLLIEST
GIEFNPLVLE KKYWPDIPKM DTDITLPSEL QLLLDQFTAK YTSSGERFKS QKLDWSNYTL
HQLSINAEFE SGTKELVVNL LQAVVILVFN DVNSYTFVEL QQLTGMEPKL LKRVLGSVSS
EKYAILSRDG DIYLFNSKFT DKSSRIKIPL SKDKDSMKIS ASVSELDTNR IILRNRTDEL
KGAIVKVMKE FKQLSVTELL NKAIEGVEKR GPVTLTELKK NIDDLVDSEY LRRVDRETLA
YIP
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