| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80337 |
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| Symbol | SUP45 |
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| ID | 4851249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1310117 |
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| End bp | 1311611 |
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| Gene Length | 1495 bp |
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| Protein Length | 436 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640392957 |
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| Product | transcriptional release factor (ERF1) |
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| Protein accession | XP_001387480 |
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| Protein GI | 126274235 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1503] Peptide chain release factor 1 (eRF1) |
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| TIGRFAM ID | [TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.565887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0934364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | CATGTCTCAA GAAACCGACG CTGAAAAGAA CATCGAGATC TGGAAGGTCA AGAAGTTGAT
CAGATCGCTT GAAGCGGCCA GAGGAAATGG GACGTCTATG ATTTCGTTGG TGATTCCACC
AAAGGGACAG ATTTCACTCA CACAGAAGAT GTTAACTGAA GAATATGGTA CCGCTTCCAA
TATCAAGTCG CGTGTTAATA GATTGTCGGT GTTGTCGGCA ATTACCTCTA CCCAGCAGAA
GTTGAAGTTG TACAACTCAG TGCCCAGGAA CGGGTTGGTT GTGTACTGTG GAGATGTGAT
CACTGATGAA GGTAAGGAAA AGAAGTTGAA CATTGACTTT GAACCTTTCA AGCCTATCAA
CACCTCCTTG TACTTGTGTG ACAACAAATT CCATTTGGAG GCGTTGTCAG AGTTGTTAGA
AAACGATGAC CGGTTTGGAT TTATCATCAT GGACGGTAAT GGAGCTTTGT TCGGTGCCGT
CTCGGGAAAC ACGAGAGAAG TGTTGCACAA GTTCACTGTG GATTTGCCCA AGAAGCATGG
TAGAGGTGGT CAGTCTGCCG TTCGTTTCTC GCGTTTGAGA GAAGAAAAGA GACACAACTA
TATCAGAAAA GTTGCCGAAG TCGCTGTGCA AAACTTTATC ACCGCCGATA AGGTCAATGT
TAAAGGTTTG ATTTTGGCTG GTTCGGCTGA TTTCAAAACC GAGTTGTCCA AGTCTGACTT
GTTTGACAAC AGATTACAGG CCAAGGTGAT CAAGATCGTC GATATCTCCT ATGGGGGTGA
AAACGGGTTC AACCAAGCTA TCGAGTTGTC TGCTGAGACA TTGGCCAACG TCAAGTTTGT
CCAGGAAAAG AAGTTGTTGA ATGAGTACTT TGACGAAATC TCTCAGGATT CTGGCAAGTT
CTGCTACGGT ATCGAAGACA CCTTGAAGGC GTTGGATTTG GGAGCCTGTG AAACCGTCAT
TGTGTACGAA AATTTGAACA TCATCCGTTA CACCTTGAAG GACGTTGAAG GAGTTGAGGT
CGTTGCTCAC GCTAATCCAG ACTTGGCTGA CAAGTCGTGG CAGGAGGACA AAAAGACTGG
CACTGACATG GAAATCATAA AAGAAGAGTC TTTCTTGGAA TGGTTGGCTG AAAACTACAA
AAACTACGGT GCTAACTTGG AGTTCGTCAC TGACAGATCA TCTGAGGGTG CCCAATTCGT
CCAAGGTTTC GGTGGTATCG GTGCTATGTT GAGATACAAG GTCAACTTCG AACAGTTGGT
CGATGAATCC GACGATGACG AATACTTTGA CGACGATGAC GACTTCATAT AAATCTAGAG
TTTTCAGTAA ATTATAGTTC AGGTCAGGCG CAAATAACAT ACACATCATC ATCTAAAAAG
ACATACATCA TCTGTCTTGG TAATTCCCGC TTTGGTCCTC ATGTTTCCTT TCCTTTGGGT
CTTTTATGTT TCCTTGTTCT AGCTTTTACT TTCAATATAA ACTGTATAAT CTTTC
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| Protein sequence | MSQETDAEKN IEIWKVKKLI RSLEAARGNG TSMISLVIPP KGQISLTQKM LTEEYGTASN
IKSRVNRLSV LSAITSTQQK LKLYNSVPRN GLVVYCGDVI TDEGKEKKLN IDFEPFKPIN
TSLYLCDNKF HLEALSELLE NDDRFGFIIM DGNGALFGAV SGNTREVLHK FTVDLPKKHG
RGGQSAVRFS RLREEKRHNY IRKVAEVAVQ NFITADKVNV KGLILAGSAD FKTELSKSDL
FDNRLQAKVI KIVDISYGGE NGFNQAIELS AETLANVKFV QEKKLLNEYF DEISQDSGKF
CYGIEDTLKA LDLGACETVI VYENLNIIRY TLKDVEGVEV VAHANPDLAD KSWQEDKKTG
TDMEIIKEES FLEWLAENYK NYGANLEFVT DRSSEGAQFV QGFGGIGAML RYKVNFEQLV
DESDDDEYFD DDDDFI
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