| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_80203 |
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| Symbol | VPS72 |
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| ID | 4851234 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1273547 |
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| End bp | 1276578 |
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| Gene Length | 3032 bp |
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| Protein Length | 896 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640392942 |
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| Product | vacuolar targeting protein |
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| Protein accession | XP_001387886 |
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| Protein GI | 126274220 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.397004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0921162 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CCATAACCGC TTTCTTAAGA CTGTCCGTAT CCTCGTCCAT CCATTCAACT GACACTCTGT
CCCACACTGA ACCTTCGCAT ATATAGTACC GCTAAATCTC CCTGCAACTA AGTCCCCACA
GTTTCTATGG CACCAGAAAC AGGCCCAGAC CCAGGCGAAA ACAGCACAGA GTCTATCGCC
AGAAACTTGG CTGCTGAAGT CCCGAACGTC GTCTCGGAAA ACTCCCAGTC TGTTTCTAAC
GGCATCTCTA GTCGCACATC TGAGAATCCA TTTGCCAATG TAGATGATAC GACTCCACTC
TTGAACAGCA ACGAATCCTA CACTAATGAA AACAACGAAG ACGAAAACAA TACGACATGT
GACACCAATT TCAATAACAA TGATGACGAA TATGACACGC AGTCTAAGTT TGACTCCGAG
TCTGTCCTCA AGAAGATCAA AAGACCGTTC TGGTGGTTTT TCGCTTTGGG AATAGTGGCT
ATCATCATCT TCGAGCTTTC CTTTCTTCCT CGGACTTCTC TCAGTAGAGA CTTCAGAAGA
TGGTACGGGC TACATCTCAC ACGTTCAGAC GTCAAGAGAC ACTTTATCTT ATTTTCAGGA
ATTGGAAATT CTCATGACAG TTTGACCACT GAAGAGTACA TCAACACCTG GCTCACAAAC
TTGACTGCTA TTAACAGCAA GAGTCCAGCC AACATTATTG CCGACGACAA CATAGAGCTA
GTTTCACTTG TAGAGAAAAC ATTCAAGAAG TTCGGCTTCA AGACTTCATC TCATTCTTAC
GATGTTCCCT TTTTGCAGAG ACCACAATCT CTGTCTGTGT CACTTGTAGA CTCTCTGAAT
GGGAATGTAG TTTATAATGC CAACTTGAAG GAACCTCACT ACAAGACTCC TGCCTTTTAT
GCTTTTGGAG CTAATTCGTC CGCAGCGGGC GATTACATCT TTGTCAACGA AGGTACTATC
TCGGACTATC TCACTCTCAC GGCTCGCAAT TATGACATAA ATGGCAAAAT TGTCATCGTG
AAGTCAGTCT TGAATTCAAA CATATCTGTA GCAGAAAAAG TATTGATTGC TGAGAAGTTC
GGAGCGATAG GCTTCATCAA CTATTACGAC TTGCAACTGG AAAACAACAA GGAAAGTGAG
TTGCAATTGA ATATAGCCAT TTCTCGCGAC AACGTAGTTA CTGGTCATAT TGGCAATTGG
AAGCGACCTT CGATCCCGGC CATTCCATTA AGTCGTAAGG CTGTCAATCC CATTTTGGGC
ACTTTGGCGA AGAGTAAACA GATGGAAGTG GTTTCTGAAT GGGAGTACAA TCCGACTAAT
ATCGGAGGAT CGCTTACACT CAACATTTCA GCGGTATTTG AAGATACAAA GACGCGTAGA
TTGACCAACA TAGTAGGAAC ATTAAAGGGT GTGATGAATG ATGGTAATAT TATTATTGGA
GCCAGGAGAG ATTCGTTGAC ATCTTCGAAT CCTTCCAGTG GTCACGCGGT GTTGTTTGAA
ATCATGAGAA ACTATCAACG TTTGACCATC AAAGGGTGGA AACCGTTGAG AACAATAAAG
TTCATTTCTT GGGATGGTTC TTCCTCTGGC GTACTTGGAT CTCAGTTGTT GATAAATGAC
ACGAATGTTT TGGACCCTAA GCAATCTGTT ATTGCCTATA TTAATATCGA TGGCGATGCT
GTCACGGGTT CCCGATTCAA AGTTGATTCT AACCCGTTGT TCAATCATCT CTTGAGAAAA
ACAGCCAAGT ATGTTCCCAT TCCGAAAACT GCTGCTTCGT ATAAGACGTT GTCTGAAGTG
GACAAGGAAA AGTTTTTCAA AAGTTTGGAC GACACGGCTA CCAATCAAGC TGACGAAATG
ATGAAGATAT TCAAACTCAC ACAGGACGAT GTAACTGCAG ATGATGACGA TGCTGATGAC
GATAATGACA ACGACAACGA CGATGACGGA GATGACGAGG ACGGCTACAC TACTTTACAC
AAGTATTGGT CCAAACAGGA TAACAATACG ATCCATGGAA TATCGGGACC GGAATTGACA
CATTCTGAGG CTTTCATTTT CCAAGGTCAC TTGAGTACAC CTTCTATCAA TATCAAGTTT
GATAATGATG CCAAGCGTGA CTCTTCGTTG TATGTTCCTA ACTCTAATTA CTATTCGTAC
GATTGGCTTG TCAAGAGACA AATAGACAAT GACCTACTTT TGCATGGTCT GTTGATTCGT
TTCATAGGTT TGTTGGCGAT CTCTTTGAGT GAACATGAAA TGGTAGAAGT CAGAACCAGA
TATTACTATC GTGATATCAA TCGATTCTTT TCTTTCTTCC TCATTGAAAA CCAACCCCAA
TTATCGAAGT GGGGTCAAGA CAAAGTTTCC TCGTATCTTA TAAACAAATC GTACATTTTA
CTGGATCTCA AGCGAGATTT GAAAGACGAA CCTACAGTGA GATTCGTTGA CTTGCTTTCG
CAATTTCAGG TGTTACTCAA CGACTTGACA CACCAATCGT TGATTTTCGA CAAGTGGAAT
AAAAAAGTTC AAGAGGGATT AATCGAAGAT TACCCTTGGT ATAGATGTTA TAAAAAGTTT
GCTCATTTTG CCCAGTTCAA GGTATCCAAT CACAAGTTGC TCCATTTGGA GCGTGAGCTT
ACTTTGAACC CGAGAGATTA CCAGTTTCTC CAGAATGGCA ATGGAAATGA CGAGAAACAG
AAAGAAGCAT ACTTCAACCA TGTTATCTAT GGGCTTCCCA AGTTCTCTGT CAACTCTAGT
ACAGATTATC TTAACAGCCG ATTCAAATAC AGCACATTCA CCAATCTCCA TGAATCGGTA
CAAGAGAGTG ATTTCGAGCT AACCGTCAAA TGGCTAGCAG TTACTTATGA TAAGTTACGA
AACTTAAATT ACAAAATGAC ATAAACAGGT TTTCAGTTCG GTACTATAGT TTTGGAAGTA
ATATACTAGC TATCTATTTC TTTATCTATT TATTTATTAG TGTATTTATT GCTTTATTTG
TGTGTTTATT TCATTTCTTA TCCGATTCAA AA
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| Protein sequence | MAPETGPDPG ENSTESIARN LAAEVPNVVS ENSQSVSNGI SSRTSENPFA NVDDTTPLLN
SNESYTNENN EDENNTTCDT NFNNNDDEYD TQSKFDSESV LKKIKRPFWW FFALGIVAII
IFELSFLPRT SLSRDFRRWY GLHLTRSDVK RHFILFSGIG NSHDSLTTEE YINTWLTNLT
AINSKSPANI IADDNIELVS LVEKTFKKFG FKTSSHSYDV PFLQRPQSLS VSLVDSLNGN
VVYNANLKEP HYKTPAFYAF GANSSAAGDY IFVNEGTISD YLTLTARNYD INGKIVIVKS
VLNSNISVAE KVLIAEKFGA IGFINYYDLQ LENNKESELQ LNIAISRDNV VTGHIGNWKR
PSIPAIPLSR KAVNPILGTL AKSKQMEVVS EWEYNPTNIG GSLTLNISAV FEDTKTRRLT
NIVGTLKGVM NDGNIIIGAR RDSLTSSNPS SGHAVLFEIM RNYQRLTIKG WKPLRTIKFI
SWDGSSSGVL GSQLLINDTN VLDPKQSVIA YINIDGDAVT GSRFKVDSNP LFNHLLRKTA
KYVPIPKTAA SYKTLSEDDV TADDDDADDD NDNDNDDDGD DEDGYTTLHK YWSKQDNNTI
HGISGPELTH SEAFIFQGHL STPSINIKFD NDAKRDSSLY VPNSNYYSYD WLVKRQIDND
LLLHGLLIRF IGLLAISLSE HEMVEVRTRY YYRDINRFFS FFLIENQPQL SKWGQDKVSS
YLINKSYILL DLKRDLKDEP TVRFVDLLSQ FQVLLNDLTH QSLIFDKWNK KVQEGLIEDY
PWYRCYKKFA HFAQFKVSNH KLLHLERELT LNPRDYQFLQ NGNGNDEKQK EAYFNHVIYG
LPKFSVNSST DYLNSRFKYS TFTNLHESVQ ESDFELTVKW LAVTYDKLRN LNYKMT
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