Gene PICST_74654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_74654 
SymbolQOR1 
ID4851247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1305648 
End bp1306820 
Gene Length1173 bp 
Protein Length364 aa 
Translation table 
GC content45% 
IMG OID640392955 
Productquinone oxidoreductase 
Protein accessionXP_001387895 
Protein GI126274233 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.907908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0207844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AACTGCTTCA ATTTCAAATA ATTAAAAGCT ACAATGAGTA TTCCCACCTC TGCCACCAAA 
GTTGTTTTAA AGAACGCTCC TACTAAGGAA GTCAACTACG AGTTCGGCCA ACCATCTTCT
ACTTTCGATG TTGCTACCGA GAAGCTTCCA GAACTCCAGG ATGGCCAGAT TTTGGTAAAA
ATCTTGTATC TCTCCAATGA CCCTACTCAA AGAACCTGGA TGCAAAAGGA TCAAGATTTG
AGCAGAGCCT ACGCTCCACC AATCTTGCCA GGTGATGCTG TCAAGTCATT GGCTTTGGCT
GAAGTTGTTG CTTCCAAGTC TTCCAAGGCT GCTGTTGGTG CTGTTGTCTC CGGTAGATTT
GAATGGGCTG ATTATGCTGT TGCTAGCGAA GCACTGATCT TCAACATTGT AGACCAATCC
AAGGGTTTGC CATTGCCATT CTACTTGTCT GTTCTCGGTA TGACCTCTTT GACAGCCTAC
TTTGGTTTGA CTGAAGTTGG TCAATTCAAG AAGCCAGCTG AAGGTGAGAA GGGTCCAATT
GTTGCTGTAT CAGCTGCTTC TGGAGCCACA GGCTCTATGG TTGTCAAGAT TGCCAAGCAC
ATCTTGGGTG CCTCAAAGGT CATTGGTATC TCTGGTTCCG ACGAAAAGTG TAAGTATGTC
GAAAGCATCG GTGCCGACTA CTGCGCCAAC TACCACGACC CAGAATGGAA GGAAAAGTTA
ACTAAAGAAA TTGGCCAAGA TTACATCGAC ATCTACTTCG ACAACGTTGG AGGTGACATC
TTGGGTTTCA TGTTGTCCAA GATCAAGAGA TTCGGCCGTG TAGTAGCCTG TGGTGCCATT
TCTGGCTACA ATGACAGAGA ATTGATCAAG GTTCCAAACT GGGGTGAAAT TATCACCAAC
AGTTTAACCG TCCAAGGTTT CATTGTTGGC AACTACCTTG CCAAGGTTCC TGAAGCCATC
GCTGTTCTTG CTGACGGTCT CACCACCGGC AAACTCCAAG TTGCTGAATC ATTCCATGTC
GAAGACCTCA GTGAAAAGGA AGACAAGTTC GAGCAAATTC CACAGGTGTG GAAGCTTTTG
TTTGGTAACC AAAAGCCAAA CGGTAAGTTG ATTACAAAGA TCGCTTAAGT GTATGATAAT
ATGTATGACT AGCTATAATA AACATTAAGC TGT
 
Protein sequence
MSIPTSATKV VLKNAPTKEV NYEFGQPSST FDVATEKLPE LQDGQILVKI LYLSNDPTQR 
TWMQKDQDLS RAYAPPILPG DAVKSLALAE VVASKSSKAA VGAVVSGRFE WADYAVASEA
LIFNIVDQSK GLPLPFYLSV LGMTSLTAYF GLTEVGQFKK PAEGEKGPIV AVSAASGATG
SMVVKIAKHI LGASKVIGIS GSDEKCKYVE SIGADYCANY HDPEWKEKLT KEIGQDYIDI
YFDNVGGDIL GFMLSKIKRF GRVVACGAIS GYNDRELIKV PNWGEIITNS LTVQGFIVGN
YLAKVPEAIA VLADGLTTGK LQVAESFHVE DLSEKEDKFE QIPQVWKLLF GNQKPNGKLI
TKIA