| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_74317 |
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| Symbol | TOP2 |
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| ID | 4850873 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 291484 |
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| End bp | 295909 |
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| Gene Length | 4426 bp |
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| Protein Length | 1439 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640392581 |
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| Product | DNA topoisomerase II |
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| Protein accession | XP_001387295 |
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| Protein GI | 126273808 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.303106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTTTTCTTTC TCCTCTTGAG CTTCACTGAA CATGTCTGAC TTCGACGAGT CGGCCTCCGA
GTCCGACTAC TACTCAGATA ATTCAGACGA CTTTGTTAGT GAATCTTCCA AGTCTTCCAA
GTCCTCAAAG TCGTCTAAAT CAGCAGCCAG TAAATCAAAG ACTGCGAAAT CCAAAACCCC
CTTATCTGAT GCCACGAACA CACCCCTTAC GTCCACAGAC TCGTCTAATG GGACCAAGTC
CAAGCTGAAT GCCTCTGAAA CGTATCAGAA GCTTTCCCAG TTGGAGCATA TCTTGAAGAG
ACCAGACACG TACATCGGAT CTGTGGAGAG AACAAAAATG GAGATGTGGA GTTATGATGA
AGCCTCTGAC GAAATGGTAT ACAAGGAAGT CTCGATAGTT CCTGGCCTCT ATAAGATCTT
TGATGAGATT CTTGTCAACG CTGCAGACAA CAAGATCAGA GATCCCACCA TGAAGAACAT
CCGTGTCAAG ATTGATCCGG AGAACAACAC TATCCAAGTG ATGAACGATG GAAGGGGAAT
TCCAATCGAA ATCCACGAAA AGGAGAAGAT CTACATCCCG GAATTGATTT TCGGCAACTT
GTTGACGTCT TCCAACTATG ACGATGACGA AAAGAAAGTT ACCGGTGGTA GGAATGGGTT
TGGTGCCAAA TTGTGTAATA TCTTTTCCAC AGAGTTTCAG TTGGAAACGG CCGATTTGAA
TACCGAATTG TTGTATAAAC AGACGTGGAC AGGCAACATG TCACAAGTGA CAAAACCCAA
GATTACGAAG TTGAAGACGA AGAAAGAGTA CACTAAGGTT TCGTTCAGAC CGGACCTCTC
CAAATTCGGT ATGGAATCGT TAGATGAAGA GATCTTGTCA GTTTTGAGAC GTAGAGTTTA
CGATTTGTGT GGTACCGTCA AGGATTGTAA TGTATACCTC AACGACAAGA AATTGAACGT
GCGTAACTTC AAGAGCTACG TCGAAATGTA TGTCAATGCC ATCAAGAAAA GGTCGCCTGA
TACAGCCTTG GAAGAAAACA ACGGTACCAA ATACACCACT GTGGTCCACG AAGTGTTCAA
TGACAGATGG GAATTGGCTT TTGCTGTTAG TGATGGTTCC TTCAATCAAG TCAGTTTCGT
CAATTCTATT GCTACCACTT CTGGAGGTAC CCATGTAAAG TATGTATCAG ACCAAATAAT
CAATAAGCTT GTGGAGACGT TGTCCAAGAA GGAAAAGGGC AAGAAGAAAT TAATGATCAA
GCCACAGGAG GTCAGAAACA ATATGTTCTT ATTTCTCAAC TGTTTGATCG AAAATCCTGC
CTTTACGTCA CAGACAAAGG AACAATTGAC CACCCGTGTA TCTCAATTTG GCGGAAAACC
CAGCGAGAAA TTGGTGATTA GTGATAATTT CATCAGCAAG ATCTTAAAAA CCAGTATAGT
CGATAAAATA CGTGACATCG CTAATGCCAA CGAAGACAAG GCTTTGCAGA AAGCCGATGG
CTCCAAGAAA CTGAGAATCA AGGGCCAAGT CAAGTTGGTT GATGCCAATA AGGCTGGAAC
CAGAGACGGA AACAAGTGTA CACTTATCTT AACTGAAGGT GACTCTGCCT TGTCCCTAGC
TGTGTCTGGT TTGGCTGTTG TAGGTCGTGA CTATTATGGT TGTTTCCCGT TGCGTGGTAA
ACTTTTGAAC GTTAGAGAGG CCTCAGCAGA TCAGATCGCC AAAAACACAG AAATCAATGC
TTTGAAGCAG ATCATTGGTT TGCAACATAA AAAAGTATAT ACTCCAGAGA ACGCGAAAAC
TTTGCGATAT GGCCACATCA TGATCATGAC CGATCAGGAT CAGGATGGAT CTCATATCAA
GGGATTGATT ATCAACTTTT TGGAAACTAG TTTTCCAGGC TTGTTGAACA TCCCTGGCTT
TTTGTTGGAA TTTATTACTC CAATTATCAA AGTCACAATT AAGAAGCGTG GTGGAGGCAA
GGAAGTGATT CCATTCTATA ACATGCCCGA GTTTGAAACC TGGCGTGAAA GAGAAGGTGG
AAACTCACGT TGGTCGCATA AATATTATAA GGGTTTGGGT ACTTCCACTC CGCTTGAAGC
ACGTCAGTAC TTTTCTGCGT TGGATAAGCA TTTGAAGCGA TTCCACGCCT TGCAAGAAGA
TGATAAGCAA TATATAGACT TGGCCTTTTC CAAGAAGAAA GCCGACGAAA GAAAGGAATG
GTTGCAGGGA TTCCAGCCAG GAACTCATTT GGATCCTAAT TTGACAGAGA TTCCAATCAG
TGATTTCATC AACCAGGAAT TGATCTTGTT CTCTATGGCC GATAATGTCA GATCCATCCC
ATCAGTCTTG GATGGCTTCA AGCCTGGTCA ACGTAAAGTG TTGTATGGTT GTTTCAAGAG
AAACTTGAAA CTGGAAATCA AGGTAGCCCA GTTGTCTGGT TATGTTTCTG AAAAGACTGG
ATACCACCAT GGTGAACAGT CGTTGGTTCA AACCATTATA GGGTTAGCCC AGAACTTCGT
GGGCTCTAAT AATATCAACT TATTGAAACC AAATGGTGCT TTTGGTACGC GTGCTGCTGG
TGGTAAAGAT TTCTCTGCTG CGAGATATAT TTTTACCGAA ATTTCCAAGA TCACCAGGGC
CATTTTCAAC CCATTGGATG ATCCAATCTA CACATACGTT CAAGATGATG AACAGTCGGT
TGAGCCTGAA TGGTATTTGC CGGTAATTCC AATGTTGTTA GTAAATGGTT CGGAAGGTAT
TGGTACTGGT TGGTCTACCA ATATCCCCAG TTACAACCCG CTTGACTTAG TCGATAATAT
CAGAAGACTT ATGAACGGAG AGCCAATGGA AGAAATGAAA CCATGGTTCA AGGGTTGGGA
AGGTACTATT GAGCCCAACG GTCCAGACAA ATACAAGGTA GTAGGCAAGA TTGATCAGAT
AGACGAAACT ACTGTTGAAA TCACAGAAAT TCCTGTCAAG ACCTGGACCA ATAACGTCAA
AGAGTTCTTA TTGGCCGGTT TGGGTAATGA GAAAACACCA GCTTGGATCA AGGATATGGA
AGAACAACAT GGACTCAACA TCCGCTTTGT GGTCAAGATG TCTCCTGATG AGATGGCTAA
GGCTTTAAAG GTTGGCTTAT TGGAAAAGTT CAAGTTGATT TCTTCCATCA GTATGTCCAA
CATGGTTGCA TTTGATCCAT TGGGGAGAAT TAAGCGTTAT TCCAGCGCTC AAGAGATCTT
GCGTGATTAT TACTATGTCA GATTAGAGTA CTATCAAAAG CGTAAGGACT TCATGATGGA
CGAATTGCAA AACCAACTTA CCAAATTCAG CGAGCAAGCA AGATTTGTCA AGATGATTAT
AGACAAGCAA TTGTCAGTGT CGAACAAGAA GAGAGTAGAC TTGGTAAAAA CTTTGGAAGA
TCTCAAGTTT GTTAAGTTCA ATAAGAATAA CAAGCCAGTA TCTGAAACTG GTAACGACTC
CTTGTTCTTG GCTGCGGAGG AAGATATCGA AGAGGCAGAA GCTGAAGTTG GAGATGTGAG
CCAATTGCTA ATTGGAGGTA TCCAGGTTGG CAACGAAGAT AACGAGCACA AACCTGAGAC
CATCTATTCC CATTATGACT ATTTGTTGGG AATGTCCATT TGGTCGTTGA CCAGAGAAAG
ATACGAAAAG TTGTTGCAGC AGAAAGATGA AAAGGAACAT GAGTTAAATG ACTTGTTGAA
GAAGTCTGCG AAGGATTTGT GGAACTACGA TTTAGATGTG TTTGTAGAAG AATGGGAGAA
ATTCTTGGAC GCTGACTTGC AAGAAAGAAT GGAAATGATT CCTACCAAGG GCACTAAGAA
GACAGCAAAG AGAACGAGAA AGCCAGCTGT AAAGCCGATT GTAAAGAAGG AGGACGATTC
TGAACCTCCA AAAAAGAAAG CAGCTACTAA CAAATCTAAG TCTATTACTC CTGTTCCAGA
AATCAAAGCC AAGACGGAAG TCAAGAAGGA AAAGCCTGAT GTTCTTTCTT TCTTCTCTGC
CAGTTCAAGT TCTCCTAACA CAAGCATTTC CAAGAGTAAG CACGTAATCA ACTTGTTCAG
TGACAGTGAG GATGATGTTA TTTTGGGATT GAGTAATGAA CCTACTCCCA AGAAGAAGAC
AGCACCCATA GTCAAGAATG AGCCTGCCCC CAAGAAGTAT TCCAAGCCCA AACCCGGCAC
CAAGGCTGCA CTCATGGATG AGCTTGAAGA CTTGGGAGTT GTTGGATTAG ACAACAAGCC
AGTAAAGAGA GCCAAGAAGA AAATCACCTA TTCTGTCTTT GATTCCGAAT CTGAAGAGGA
AGATGACGAA GACATGGAAG AAGAAGAAGA AGACGACGAC GACGAATACG AAGAGGATTA
GATAGAGTAG TTATAGTATT AGTATTAGTT ATAAATTGTT CTGATA
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| Protein sequence | MSDFDESASE SDYYSDNSDD FVSESSKSSN KSKTAKSKTP LSDATNTPLT STDSSNGTKS
KLNASETYQK LSQLEHILKR PDTYIGSVER TKMEMWSYDE ASDEMVYKEV SIVPGLYKIF
DEILVNAADN KIRDPTMKNI RVKIDPENNT IQVMNDGRGI PIEIHEKEKI YIPELIFGNL
LTSSNYDDDE KKVTGGRNGF GAKLCNIFST EFQLETADLN TELLYKQTWT GNMSQVTKPK
ITKLKTKKEY TKVSFRPDLS KFGMESLDEE ILSVLRRRVY DLCGTVKDCN VYLNDKKLNV
RNFKSYVEMY VNAIKKRSPD TALEENNGTK YTTVVHEVFN DRWELAFAVS DGSFNQVSFV
NSIATTSGGT HVKYVSDQII NKLVETLSKK EKGKKKLMIK PQEVRNNMFL FLNCLIENPA
FTSQTKEQLT TRVSQFGGKP SEKLVISDNF ISKILKTSIV DKIRDIANAN EDKALQKADG
SKKLRIKGQV KLVDANKAGT RDGNKCTLIL TEGDSALSLA VSGLAVVGRD YYGCFPLRGK
LLNVREASAD QIAKNTEINA LKQIIGLQHK KVYTPENAKT LRYGHIMIMT DQDQDGSHIK
GLIINFLETS FPGLLNIPGF LLEFITPIIK VTIKKRGGGK EVIPFYNMPE FETWREREGG
NSRWSHKYYK GLGTSTPLEA RQYFSALDKH LKRFHALQED DKQYIDLAFS KKKADERKEW
LQGFQPGTHL DPNLTEIPIS DFINQELILF SMADNVRSIP SVLDGFKPGQ RKVLYGCFKR
NLKLEIKVAQ LSGYVSEKTG YHHGEQSLVQ TIIGLAQNFV GSNNINLLKP NGAFGTRAAG
GKDFSAARYI FTEISKITRA IFNPLDDPIY TYVQDDEQSV EPEWYLPVIP MLLVNGSEGI
GTGWSTNIPS YNPLDLVDNI RRLMNGEPME EMKPWFKGWE GTIEPNGPDK YKVVGKIDQI
DETTVEITEI PVKTWTNNVK EFLLAGLGNE KTPAWIKDME EQHGLNIRFV VKMSPDEMAK
ALKVGLLEKF KLISSISMSN MVAFDPLGRI KRYSSAQEIL RDYYYVRLEY YQKRKDFMMD
ELQNQLTKFS EQARFVKMII DKQLSVSNKK RVDLVKTLED LKFVKFNKNN KPVSETGNDS
LFLAAEEDIE EAEAEVGDVS QLLIGGIQVG NEDNEHKPET IYSHYDYLLG MSIWSLTRER
YEKLLQQKDE KEHELNDLLK KSAKDLWNYD LDVFVEEWEK FLDADLQERM EMIPTKGTKK
TAKRTRKPAV KPIVKKEDDS EPPKKKAATN KSKSITPVPE IKAKTEVKKE KPDVLSFFSA
SSSSPNTSIS KSKHVINLFS DSEDDVILGL SNEPTPKKKT APIVKNEPAP KKYSKPKPGT
KAALMDELED LGVVGLDNKP VKRAKKKITY SVFDSESEEE DDEDMEEEEE DDDDEYEED
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