Gene PICST_69783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_69783 
Symbol 
ID4851659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2473156 
End bp2473748 
Gene Length593 bp 
Protein Length165 aa 
Translation table 
GC content42% 
IMG OID640393367 
Productpredicted protein 
Protein accessionXP_001386808 
Protein GI126275185 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAAGGCTTTT TAGTAAACCT ATTGATAGAT TAGTCCATAA TGCCTCCAAA GTTCGATCCA 
TCTGAAGTTA AGTACCTTTA CTTGAGAGCC GTCGGTGGTG AAGTCGGTGC TTCCTCCGCC
TTGGCCCCAA AGATTGGTCC ATTGGGTTTG TCCCCAAAGA AGGTTGGTGA AGATATCGCC
AAGGCCACCA AGGACTTCAA GGGTATCAAG GTTACCGTCA AATTAACAAT CCAAAACAGA
CAAGCTACCG CTTCTGTTGT TCCATCTGCC TCTTCCTTAG TCATCACTGC CTTGAAGGAA
CCACCTAGAG ATAGAAAGAA GGAAAAGAAC GTCAAGCACT CTGGTAACAT TCCATTAGAA
GAAATCTTCG ACATTGCTAG ACAAATGAAG GAAAAGTCCT TCGGTAAGAC CTTGGCCTCT
GTTTCTAAGG AAATCTTAGG TACTGCCCAA TCCGTTGGTT GTCGTGTTGA AGGTAAGAAC
CCTCACGACA TCATCGACGC TATTAACGCT GGTGAAATTG ATGTTCCAGA AAACTAAATT
AATTTATGTA CAAAAGTGTT TTAATAGGGT TTAATTGATA TTTTACGTTC TAG
 
Protein sequence
MPPKFDPSEV KYLYLRAVGG EVGASSALAP KIGPLGLSPK KVGEDIAKAT KDFKGIKVTV 
KLTIQNRQAT ASVVPSASSL VITALKEPPR DRKKEKNVKH SGNIPLEEIF DIARQMKEKS
FGKTLASVSK EILGTAQSVG CRVEGKNPHD IIDAINAGEI DVPEN