| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_69625 |
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| Symbol | |
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| ID | 4851695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2567686 |
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| End bp | 2572746 |
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| Gene Length | 5061 bp |
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| Protein Length | 1636 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393403 |
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| Product | predicted protein |
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| Protein accession | XP_001387061 |
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| Protein GI | 126275291 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0930816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CACCGTCTGC CATGTCTGTG TTTGAACCGA CGTGTCTGCT ATGGCACTAT GACGACTTGA
CCCGCTGCGG CCGGAACAAG CTCGCCTACT ACCCTCCGCT CGTGGTGGGT TCCATCTCAT
TCGTGATTCT CGTTATTAAG TCCTCCATCT CGCTCTACAA GAGACGCCAG TCAATTCGTC
TTTCCGAAAA CGAAAGCCAA CCCCTTTTGG CCAGTTCCAC TGGATACGGA GCTGTAGACC
CTGCTGCCAT CCAAAACGAA TCTATTTCCT TAAAAGCGCG TCATTTTGAC ATTGTTCGTC
TTCCAGACAC CAACGAAGAC GGCTCACCCC ACGGAGTAAT CCAGGAAGTG TACAAAGACG
TGTACGAAAG AGTTAGAGTC GTTGTCGAAT ACCTTCTTGT CGCTTTCCAA GTTGCATTGG
CTCTCAGTTT GTTCTTTTAT GCGGATTCCG CCAAAGAATT TAAACACGAA CCTTTGACTC
CATACGTTAA ATCCACCTTC TGGCTATACC TTCTCGTGAT TGCTACTTTC AGAGTTATCA
ACTTGAGAAA GGTCAATGTC CGTTTGCCTA ACTTGTGGGT CCACTCGACT ACGCTCTATT
TCTTCAACGT GTTCCCTACG CTTCTCACCT TCAGGTCTGC CCTCGTACAG GGCTCTAGAC
TTTCTGATCA TGTCCGTTTC TACTATGTAA GCGAATTCAT TGCCTCGCTA GTACTCTTGG
TGTTGAACTT CACTGCCAAA ATCGGAGACA AACCTTGTAC TCTCTATATA ACCAGCGATG
GCACTGTACC TTCTCCTGAA CACATTTCTT CTGTCTGGCA ATTTGTCACT TACTCGTGGT
TGGACAAGAT GATCTGGAGA GCCTGTAAGA GTACCATGAA CCAAGAAGAC ATCTGGGGCT
TGAGAGACGA CGACTATTCC CTCTATATTC TCAAAGCCTT TGAGGCTTCC AAATCTACTG
CCAGATTCAC CTGGAAGTTG TTTTCGCACT TTAAGTACTT GTTTGCTGCC CAAGCATTTT
GGGCCATTTT GGATTCCATC TTGGTCTTTG CTCCTTCGTT GTTGTTGAAG AGAGTGTTGG
AGTACGTCGA GGATCCATCC AGCTCTCCTG CTTCTTTGGC CTGGTCCTTT GTTTTCTTGA
TGCCTATCTT CAAGATGTTT GACTCTGTTG CTTCTGGATG TTCCCTTTTC ATCGGTAGAA
GAGTCTGTCT TAGAATGAGA GCCATTATAA TCGGAGAAGT CTACGCTAAG GCTTTAAGAA
GAAAGATCAC TGTTTCGGAA GTCTCTGACG ACTCCGAATC TGAAGACGAC AAGACTGACA
AAAACGACAA GAAGGACGAA AAGGAAAAGT CTGGAAAGAA GACCGCAGAA CTCGGTGCCA
TTATCAACTT AATGGCCATA GATGCGTTCA AGGTGTCTGA AATCTGTGGC TACTTGCATT
TTTTCGTCGG TGCCATCTTG ATGCTCGTCA TCTGTATTGG TCTCTTATAC AACTTGTTGG
GATGGAGTGC CTTAGCTGGT TCGGTTTCCA TCATTGCATT GTTGCCTGTT AACTACAGAA
TCGCCAATTG GGTGTCCAAA TTGCAGGAAG ACATGCTTGC CATCACCGAC AAGAGAATCC
AGAAGTTAAA TGAAACGTTC CAGAGCATCA GAATCATCAA GTTTTTTGCC TGGGAAGACA
AGTTTTTCGA GCTGGTTATG GGCATCAGAA ACGAAGAGTT GAGCTACTTG AAGTGGAGAT
CGTTTGTATG GTGTCTTGGT GGTATGGTGT GGTTCTTGAC ACCTACTTTA ATCACCTTGA
TTTCTTTCTA CTGTTACACC ATCGTTGAAG GAAACACCTT GACTGCATCC ATTGCATTCA
CTTCGTTATC ATTATTCACG TTGTTAAGAT CGCCCTTGGA CCAGTTATCT GATATGACTT
CATTGGTTGT CCAGTCCAAG GTCTCTCTTG ACAGAGTTAG TGATTTCTTG GATGAAGAAG
AAACTGACAA GTACGAGCAA TTGGCAGTAG AGAGAGGTCC CAACTCGCCC TACATCGGTT
TCGAAAACGC TACATTGTCA TGGAACGCTG CCTCTGAAAA CGACTTCAAG TTGAGAGACA
TCAGCATCGA CTTCAAAGCA GGGAAATTGA ATGTCGTTAT CGGTCCAACT GGTGCAGGTA
AGACTTCCTT GTTGATGGCT TTGTTGGGTG AAATGCAACT TGTCAACGGT AACGTCTTCT
TGCCAGGAAC TACCCCTAGA GACGAGTTGA AAATCGACCC TGAAACTGGA TTGACTGAAT
CTGTTGCTTA TTGCTCTCAA TCTGCCTGGT TATTGAATGA AACCATCAGA AACAATATTA
CCTTCGGTGC TCCTTTCAAT GTAGAACGTT ACGCCAAGGT GGTAGAAGCC TGTAGTTTGA
CCCGTGACTT GGAAATTTTG TCTGCTGGTG ACTCCACTGA AGTTGGTGAA AAGGGTATTA
CCTTGTCTGG TGGTCAGAAA CAAAGAGTTT CTTTAGCCAG AGCCTTGTAC TCTAATTCCA
AGCATCTTAT CTTAGATGAC TGTTTGTCTG CTGTGGACTC GCACACTGCT TTGTGGATCT
ACGAAAACTG TATTTCTGGG CCTTTGATGG AAGGTAGAAC TTGTATCTTA GTTTCTCACA
ACGTAGCTCT TACTGTGCAG AATGCTGCTT GGGTTGTCGT GATGGAAAAC GGAAGAGTCA
AGACTCAAGG TACTCCTGAA GACTTGGTGC ATACTGGTTC TCTTGGTGAT GATGATTTGA
TCAAGTCCTC TGTCATGGGC TCCAGAAACC AGTCGTCTAC TAACTTGCAA TCCTTGGAAG
ATAAAAACGC CGATATGAAG GCTAAGGCTG CTGTTATTGA ATCGAAATTG AAGGCTGTTG
CTGACGAACA TACTGAAGAC GATAGCAAGA AAACTGATGG TAAGTTGGTA GAAGAAGAAA
CTAAGGCTGA AGGTGTTGTT AGTTCTGATG TTTATCTCGG TTACGCTAAG CTCTTTGGTG
GCTTGCCCAC TTGGGCTGTT GTCATTTCTT GTTTCGTTCT TTCTCAGGGT ATCTTCATGA
CTCAGTCGTG GTGGTTGAGA AATTGGTCTA TCGACAGTGA AAGGGCCAGC TCGTTCATGA
ATTCTATGGG TTTGGTCTCT GTGTCTAATG TCTATGATTC AACTCAGTTA ACGCTGTCTA
CAGTTGTTCG TACGTTCACT GGTGCTGCTC ATTGGATCAG TGCCTCTATC TCTGTGGCTG
AAGAATTCAA ATCTAAACAC GGCCCTCTTT ATTACATTTC CATCTATGCT ATTATTGGTC
TTTCGTATGG TATTTCTGCC TCATTGAGAG TATTTGTTAC TTTCTTTGCT GGTATCAGAG
CTTCCAACAG AATTTTCAAG AAAGTATTGA CAACAATTTT GAGAGCCAAG TTGAGATTCT
TCGACAAGAC TCCTCAGGGT CGAATCATGA ACAGGTTTTC TAAGGATATT GAGTCTGTTG
ATCAAGAATT GACACCATTT GCTGAAGGTG TGTTCATTTG CCTTGTTCAA TGTGTTTCTT
CGTTGATTTT GATTACTTTG ATTACTCCTG GCTTTTTGAT CTTTGCTTTA ATTATTGCTT
TCTTGTACTA CTTGGTCGGT TATTTCTACA TTACTTTGTC CAGAGAATTA AACAGAATTC
ATTCTGTTAC CAAGTCTCCT ATCCACCAGC ACTTCTCTGA ATCCTTGAAC GGTGTTGCAA
CCATTAGAGC CTATGGTATT GAATCCAGGT TCATGAAGCA GAATTTGAAC GCCATTGATG
CAAATAACAA GCCTTTCTTC TACATGTGGG TTGCTAACAG ATGGCTTTCC ATTCGTATCG
ATTTTGTTGG CTCCATGGTG ATGTTGTTTT CTGGTGTGTT TGTCTTGCTT TCTGCTGGAA
TAATCGATGC TGGTTTGGCT GGTTTGTCTT TGACATACGC TATTGCCTTC TCTGAAAGTG
CCTTGTGGAT CGTTAGACTT TATTCTAATG TTGAGATGAA CATGAATTCA GTTGAAAGAT
TGCAAGAATA TCTTGAAGTA GAACAGGAGC CTCCATATGA TATTCCAGAA ACGCAGCCAC
CTGCTTCTTG GCCGGAGACT GGTAGAATCA AGGTCAACGA TGTTTCGTTG AGGTACTCTC
CAGAATTACC AAGAGTGATC AAGAATGTCA CCTTTGATGT GGAGCCAAAC CACAAGGTGG
GTATTGTTGG TCGTACTGGT GCTGGTAAGT CTACCATCAT CACCGCATTC TTTAGATTCT
TGGATCCAGA AACTGGCTCC ATCCACATCG ATGGCATAGA CATCACTAGC ATCGGTTTGC
GCAACTTGCG TCAAGCCATT ACAATCATTC CACAAGACCC TACCCTTTTC TCAGGAACCA
TACGGTCTAA CTTAGATCCA TTTAGTCAGT ACACTGATGA ACAAATATTC GAAGCATTGA
AGAGAGTCAA CTTGATTGGC CGGAACGAAA CGCCTGCCAC TACTGCTGGC GAAAATCAGA
ACAAGTTCTT CAATCTTGAT GCTTCCATCT CTGAGGGTGG TGGTAATTTG TCGCAGGGTG
AAAGACAATT GGTTTGTTTG GGTAGATCAT TGCTCAAGAA CCCTAAGGTA ATACTTCTTG
ACGAAGCAAC CAGTTCTATT GACTACAAGT CGGACGCTAT GATCCAACAA ACGATCAGAG
AAGAATTCTC CAACTCCACA ATTTTAACAA TTGCCCACAG ACTAAGAACC ATCATCGACT
ACGATAAGAT ATTGGTGATG GACGCTGGTA GAGTCGTTGA ATACGAGAAT CCCTACGTAT
TAATAGCCGA TAAAACCTCG TTATTCTATA GCATGTGTGA AAACAGTGGT GAGCTTGACT
CATTGATCAA GTTGGCCAAG GAGGCTTTTG TGGAGAAGAA GAACAAACAA TCCAAAAAGT
GATTTGGGTT CAGGCTCATT ATACATTCAT ATTCCATTTC CTTAGACTTA TTCCATTTGG
TTTTTAATTT AATTGTTGGT TACCGTTTTT ATTAACTTTT TTTAGCTATA TAGTGTCTAT
TTAATAGTAT ACTATATACA T
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| Protein sequence | MSVFEPTCLL WHYDDLTRCG RNKLAYYPPL VVGSISFVIL VIKSSISLYK RRQSIRLSEN
ESQPLLASST GYGAVDPAAI QNESISLKAR HFDIVRLPDT NEDGSPHGVI QEVYKDVYER
VRVVVEYLLV AFQVALALSL FFYADSAKEF KHEPLTPYVK STFWLYLLVI ATFRVINLRK
VNVRLPNLWV HSTTLYFFNV FPTLLTFRSA LVQGSRLSDH VRFYYVSEFI ASLVLLVLNF
TAKIGDKPCT LYITSDGTVP SPEHISSVWQ FVTYSWLDKM IWRACKSTMN QEDIWGLRDD
DYSLYILKAF EASKSTARFT WKLFSHFKYL FAAQAFWAIL DSILVFAPSL LLKRVLEYVE
DPSSSPASLA WSFVFLMPIF KMFDSVASGC SLFIGRRVCL RMRAIIIGEV YAKALRRKIT
VSEVSDDSES EDDKTDKNDK KDEKEKSGKK TAELGAIINL MAIDAFKVSE ICGYLHFFVG
AILMLVICIG LLYNLLGWSA LAGSVSIIAL LPVNYRIANW VSKLQEDMLA ITDKRIQKLN
ETFQSIRIIK FFAWEDKFFE LVMGIRNEEL SYLKWRSFVW CLGGMVWFLT PTLITLISFY
CYTIVEGNTL TASIAFTSLS LFTLLRSPLD QLSDMTSLVV QSKVSLDRVS DFLDEEETDK
YEQLAVERGP NSPYIGFENA TLSWNAASEN DFKLRDISID FKAGKLNVVI GPTGAGKTSL
LMALLGEMQL VNGNVFLPGT TPRDELKIDP ETGLTESVAY CSQSAWLLNE TIRNNITFGA
PFNVERYAKV VEACSLTRDL EILSAGDSTE VGEKGITLSG GQKQRVSLAR ALYSNSKHLI
LDDCLSAVDS HTALWIYENC ISGPLMEGRT CILVSHNVAL TVQNAAWVVV MENGRVKTQG
TPEDLVHTGS LGDDDLIKSS VMGSRNQSST NLQSLEDKNA DMKAKAAVIE SKLKAVADEH
TEDDSKKTDG KLVEEETKAE GVVSSDVYLG YAKLFGGLPT WAVVISCFVL SQGIFMTQSW
WLRNWSIDSE RASSFMNSMG LVSVSNVYDS TQLTLSTVVR TFTGAAHWIS ASISVAEEFK
SKHGPLYYIS IYAIIGLSYG ISASLRVFVT FFAGIRASNR IFKKVLTTIL RAKLRFFDKT
PQGRIMNRFS KDIESVDQEL TPFAEGVFIC LVQCVSSLIL ITLITPGFLI FALIIAFLYY
LVGYFYITLS RELNRIHSVT KSPIHQHFSE SLNGVATIRA YGIESRFMKQ NLNAIDANNK
PFFYMWVANR WLSIRIDFVG SMVMLFSGVF VLLSAGIIDA GLAGLSLTYA IAFSESALWI
VRLYSNVEMN MNSVERLQEY LEVEQEPPYD IPETQPPASW PETGRIKVND VSLRYSPELP
RVIKNVTFDV EPNHKVGIVG RTGAGKSTII TAFFRFLDPE TGSIHIDGID ITSIGLRNLR
QAITIIPQDP TLFSGTIRSN LDPFSQYTDE QIFEALKRVN LIGRNETPAT TAGENQNKFF
NLDASISEGG GNLSQGERQL VCLGRSLLKN PKVILLDEAT SSIDYKSDAM IQQTIREEFS
NSTILTIAHR LRTIIDYDKI LVMDAGRVVE YENPYVLIAD KTSLFYSMCE NSGELDSLIK
LAKEAFVEKK NKQSKK
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