Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_69588 |
Symbol | CUP5 |
ID | 4851752 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 2745056 |
End bp | 2746483 |
Gene Length | 1428 bp |
Protein Length | 160 aa |
Translation table | |
GC content | 42% |
IMG OID | 640393460 |
Product | vacuolar ATPase V0 domain subunit c |
Protein accession | XP_001387092 |
Protein GI | 126275492 |
COG category | [C] Energy production and conversion |
COG ID | [COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K |
TIGRFAM ID | [TIGR01100] vacuolar ATP synthase 16 kDa proteolipid subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.406866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CATTTCCCAA GTCAATATGT CTGATTTATG GTATGTGTAT AACGTGTCAG CCGATTGGCG AAGTCTCGGC CGCGGACGTA TCTCTGGTTA TCGAATTCAG TGATCTCCTT TCCTCCAATA ATAGCCATTT CTGAGCATTG CCCAAACAAC ACATGTGTTC AGGGATTCGA CATCCAGAGG CGGAAATCGT GATATCGCCA ATCATGGTGA GCTACTCACC TAGTTGAAAC ACTGCTGAAG TGTCAATTGG CCCGGATGGA AAGTTTTCCG GCTTTCTGCA TCACCATCTC ATATCGGTTA ATCAGATAGT GATACATGAC TGAGGTGCCT CTAATTTCAC CATCGGAAAC TAAGTATCCA GTGACTCTAT GGAATGCTAG AGCCAATAAA CCTACATCGT TGTGTATGGT ATTCAGTTGA TTCCTATAGA TTCTCAGTGC AGTTAGGCGC TTTAAGTGTC ATTATCCCGT CGTTGTATCA TTAAGTGCTA AGGATCTTTA AGTTGTACCC TTCTTTATAT CAATTGCAAT CTACTCATGC TGTCCACTCC TAGTACTCTC TGCTGTCAGT ATCCATCATT AATAATTGCA TCCGTATCCT GATCTAATGG TTAATTGATT CTTTTTCGAT AATGTTTTCG CCACTGTTCG TCTGCTTAAT ACTAACCCTT CTAGCCCAGT TTACGCTCCC TTCTTTGGAG CCATCGGTTG TGCCGCCTCC ATCGTGTTCA CCTGTTTCGG TGCCTCCTAC GGTACGGCTA AGTCTGGTGT CGGTATCTGT GCCACTTGTG TCACTAGACC AGACTTGTTG GTCAAGAACG TTGTTCCTGT CGTTATGGCC GGTATCATTG CCATTTACGG ATTGGTCGTA TCTGTGTTGG TGTCAGATGG GTTGAAGCAA GAATTGCCTT TGTACTCTGG TTTCATCCAA TTGGGTGCTG GTTTATCTGT TGGTTTGTCC GGTTTGGCTG CTGGTTTCGC CATTGGTATC GTTGGTGACG CTGGTGTCAG AGGTAACGCC CAACAACCAA GATTGTTCGT CGGTATGATT TTGATTTTGA TTTTCGCCGA AGTCTTGGGT TTGTACGGTT TGATTGTCGC CTTGTTGTTG AACTCTAAGG CCGCTCAAGA TGTGAAGTGT TAAAGAATGA CGATAGGCAA CATCACAATG AATATATTTG TTGTTGAACT GTCTATACGG ATTCCCTCTC ATTCACATCA TATTTAATCG AACCAATGAA AAACGAAATT TCAATATTCA TCTATTATTG TTTTATCATA GTTAGACTCA TTTTTTTTAA TTCACTGAAA TCAGACATCT AAAATGCATC CATACGGATG GTTTCTTCAT TTATTTTTAT AGAGACCTGG GAGTCGCTCC TTGGTTTTGA TTTGTCAATT CTCTGTTAGT TGAATTTCAA TATCATAT
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Protein sequence | MSDLCPVYAP FFGAIGCAAS IVFTCFGASY GTAKSGVGIC ATCVTRPDLL VKNVVPVVMA GIIAIYGLVV SVLVSDGLKQ ELPLYSGFIQ LGAGLSVGLS GLAAGFAIGI VGDAGVRGNA QQPRLFVGMI LILIFAEVLG LYGLIVALLL NSKAAQDVKC
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