| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_69529 |
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| Symbol | ACT1 |
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| ID | 4851954 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3290345 |
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| End bp | 3292473 |
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| Gene Length | 2129 bp |
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| Protein Length | 376 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393662 |
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| Product | Actin |
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| Protein accession | XP_001386952 |
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| Protein GI | 126276128 |
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| COG category | [Z] Cytoskeleton |
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| COG ID | [COG5277] Actin and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.425094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.344688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TAATATTAGT ACAATCCCTT ATATTATAAT CATATAGATC AAACATGGAC GGTGGTATGT
ATTTTGCAGC ATTGATTGGT TCGTCGCGTC TCTCTGCTGA TTGATTGATG CGTCTGTCCC
CTGGCCTGCT CCGCTGTGTC GAGTTATTCG GCGATGTGTT GTTCGTTAAT GGGGATGGCG
ATTTTTCACC GTAACTCAGC AGAACACGGC CATCAACTCA GGCAACTTCG CCAGCCGCAT
TGTAGACGTC ACACAACTCT ACCAACAAAG CAATTGACCA ATGGCACTTC CACATTCCTC
CCGTAGGAAC CTGTTGTGCT GGTGTCGTTT GAATCGCTGG ATTTGGCTGG AATTTCGATT
CTCGCAAACC GCAGCAGATC ATTGTACCAG CGCTCCAGTC TGATCCAACG CCCGCAATAT
GACAATGGCA CCAAATATAG TCACAACAAT ACTACAGGAG TGAAACAGTA GTAGGGAGCA
GTTTGCCGCT GGTTGTGATT GCTGTCAATG TCATCAGTGC TATTGTTGTC TTAGGAGGTA
CTCGTTATCT CTGGATCGAT CCGGCAGTTA GCTACTTTTT TCTGCGACTC TCGTCCAATG
AATTTTTCAG TACTGCATTC TCGTGGATAC GTAGTGGACC ATGCTGCCAT TGAAGTTGTC
GTCGTTGATG CCGTGATCTG TCGATGTTGA TGAGGCCGAA TTTGTCGTAA TATTGATATT
AATTTTATAT CATGCTAAAT TTATTAAGCT AATACTAACA CCCCCCATAG AAGAAGTTGC
TGCTTTAGTT ATTGACAACG GTTCCGGTAT GTGTAAGGCC GGTTTTGCCG GTGACGACGC
CCCTCGTGCC GTCTTCCCTT CCATTGTCGG TAGACCAAGA CACCAAGGTA TCATGGTCGG
TATGGGTCAA AAGGACTCTT ACGTCGGTGA CGAAGCCCAA TCTAAGAGAG GTATCTTGAC
CTTGAGATAC CCTATCGAAC ACGGTATCGT TTCCAACTGG GATGATATGG AAAAGATCTG
GCACCACACC TTCTACAACG AATTGAGAGT TGCCCCAGAA GAACACCCAG TCTTGTTGAC
CGAAGCCCCA ATGAACCCTA AGTCTAACAG AGAAAAGATG ACCCAAATCA TGTTCGAAAC
ATTCAACGTT CCAGCTTTCT ACGTTTCTAT CCAAGCTGTC TTGTCCTTAT ACTCTTCTGG
TAGAACCACC GGTATTGTTT TGGACTCTGG TGATGGTGTT ACTCACGTCG TTCCTATCTA
CGCTGGTTTC TCATTGCCTC ACGGTATCTT GAGAATCGAC TTGGCCGGTA GAGACTTGAC
TGACTACTTG ATGAAGATCT TGTCTGAACG TGGTTACACT TTCTCCACCA CCGCTGAAAG
AGAAATTGTC AGAGACATCA AGGAAAAGTT GTGTTACGTT GCCTTGGACT TCGAACAAGA
AATGCAAACA TCCTCGCAAT CCTCCGCCAT TGAAAAGTCT TACGAATTGC CAGATGGTCA
AGTTATCACC ATTGGTAACG AAAGATTCAG AGCTGCTGAG GCTTTGTTCC GTCCTGCTGA
CTTGGGTTTG GAAGCTGCTG GTATCGACCA AACCACCTTC AACTCCATCA TGAAGTGTGA
TGTCGATGTC AGAAAGGAAT TGTACGGTAA CATCGTTATG TCCGGTGGTA CTACTATGTT
CCCTGGTATT GCTGAACGTA TGCAAAAGGA AATCACTGCC TTGGCTCCAT CCTCTATGAA
GGTCAAGATC ATTGCCCCAC CAGAAAGAAA GTACTCCGTC TGGATCGGTG GTTCTATTTT
GGCCTCCTTG TCTACTTTCC AACAAATGTG GATCTCAAAG CAAGAATACG ACGAATCTGG
ACCTTCCATT GTCCACCACA AGTGTTTCTA AAACCACTTG CAAAATCCTT TGTATTCTTG
TTCTGCAAAC ATTTTGTCCA ATCTCTTATC TTTCTACGAT GTTGAAGAAC ATACATTTTT
GTTAGTCCAG CTTGTTATCC TTTTTTTATT AAATAAAAAA TTTTATTGTT AAAGTTGTTT
TTCTTCTTTG TCTGTCCTGT TTTAACTCAT ATATATTCTA TATATTACAG AAAGAAAGTA
GATCATCTAA AATAAACATT TATTTGATG
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| Protein sequence | MDGEEVAALV IDNGSGMCKA GFAGDDAPRA VFPSIVGRPR HQGIMVGMGQ KDSYVGDEAQ
SKRGILTLRY PIEHGIVSNW DDMEKIWHHT FYNELRVAPE EHPVLLTEAP MNPKSNREKM
TQIMFETFNV PAFYVSIQAV LSLYSSGRTT GIVLDSGDGV THVVPIYAGF SLPHGILRID
LAGRDLTDYL MKILSERGYT FSTTAEREIV RDIKEKLCYV ALDFEQEMQT SSQSSAIEKS
YELPDGQVIT IGNERFRAAE ALFRPADLGL EAAGIDQTTF NSIMKCDVDV RKELYGNIVM
SGGTTMFPGI AERMQKEITA LAPSSMKVKI IAPPERKYSV WIGGSILASL STFQQMWISK
QEYDESGPSI VHHKCF
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