Gene PICST_69049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_69049 
Symbol 
ID4851473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1912306 
End bp1913074 
Gene Length769 bp 
Protein Length150 aa 
Translation table 
GC content42% 
IMG OID640393181 
Productpredicted protein 
Protein accessionXP_001387604 
Protein GI126274601 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAACTGGATA TACTATTTAT ATACAAATAA CGTAAACATG TCGGACTGGG ATTCTGTTAC 
TGTGATTGGA CAAAAGGCTA GAGTCGGCGG CGGCGGTCCA CGTGAAACCG TGGCCAGAAC
CTCGGCTCAG TTGAACGCCG CCAGAAGAAC TGGTGCCGTT GTTGGAACTG AAAAGAAGTA
TGGTTCCACC AACACTAGAT CCAACCCAGA AGGTCAAAGA TTGACCAAGT TGGATGCCAC
TGATGATGTG GTTGCTGTCA AGAAGCTCGA CTCTTCTGTC GGAAAAGCTA TTCAACAAGC
CAGACAAGAA AAGAAGTTTA CGCAAAAGGA CTTGGCCACC AAGGTCAACG AGAAGCCTAA
CGTCATCAAC GACTATGAAG CCGGAAGAGC TATTCCAAAC CAACAGCTTT TGGGCAAGTT
GGAGAGAGCT TTGGGTGTCA AGTTGAGAGG CAAGAATATC GGAGAACCAT TGTTCGCCAA
GAAGAAGTAA GATAAGGATT GCTTTGACAA TTCATATTCA CACGAAAGGG CAGAAGTAAT
TTTGGTAGTT TGGTTTTTAC GTCAGATTTG CAATTTTATA AAAACATTTT CAACCATCTC
AAAGATAGTT GAGAATGCTT AGCTGCTCAT GATAATGACG GGTTTACAGA CTTATTAGGT
ATTTCATTTA CGTAACGTTA TTTTTTGCTT TTTTTTGGTT TTTCTCTACT GCCATGGTGG
TTATGTTGCA TTTCTTTATA GTTGTATATA TCGTATAAAT GGCTCTGTG
 
Protein sequence
MSDWDSVTVI GQKARVGGGG PRETVARTSA QLNAARRTGA VVGTEKKYGS TNTRSNPEGQ 
RLTKLDATDD VVAVKKLDSS VGKAIQQARQ EKKFTQKDLA TKVNEKPNVI NDYEAGRAIP
NQQLLGKLER ALGVKLRGKN IGEPLFAKKK