| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_68798 |
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| Symbol | PWP1 |
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| ID | 4851317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1481425 |
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| End bp | 1483267 |
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| Gene Length | 1843 bp |
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| Protein Length | 566 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 640393025 |
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| Product | periodic tryptophan protein 1 |
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| Protein accession | XP_001387518 |
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| Protein GI | 126274348 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.715644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTCAGTAGCA TATAGAATAT GATATCGTCC AGCGCTTGGG TTCCTAGAGG CTTTGCCTCC
GAATTCCCCG AAAAGTACGA ATTGGACGAC GAGGAAATGG AAAGAATTAC GGCCATGGCC
AAATTGGAAT TGGCTGATGC AAAAGAAGAT TTGCACGAAG CCCAGGTTGA GGCTGGCGAA
ACTGACAAGT TGGGGGACCA GATCGATTTG GATGACGACT TGAAGGAATA TGACTTGGAG
AACTACGACA ACGATGGAGC AGACAGCGAA GGAGAAGAAG TGACGATGTT CCCTGGGTTA
TCTAGCGAAG CCAAGTTCCA CAAGGAAGAC GGAGAAGGTT CTGATCCCTA CTTGACTTTA
CCCACTGAAA CTGATCTTCA GGAAGAAAAG AAAGAGTCAC AGATCTATCC AACTGATAAT
TTGGTATTAG CCACAAGAAC TGATGACGAT GTTTCGTATT TGGACGTATA CGTCTACGAT
GACGGTGCCG GGGCTCCAGA TGGAGCCGAG GAAGAAGAAG AGGACAAACT CGATGCTGAT
GTAGCCAAGG GGATGGTCAG AGACTCCAAT TTGTATGTGC ACCATGATAT CATGTTGCCA
GCATTTCCCT TGTGTGTGGA ATGGATTAAC TTCAAACCTG GCTCTGAAGA TGGATCTAAT
GTAGGTAACT TCGCTGCTGT AGGTACGTTC GATCCACAGA TCGAGATATG GAATTTGGAC
TACATAGACA AGGCATTTCC TGACTTGATA TTGGGAGAGC CAGATGCCAA CTCATTTGCC
GGAGCCGGCA AGAAGAACAA GAAGAAGAAG AAGAAGTCCC AGCATGTTAC CACCCACCAC
ACCGATGCGG TGTTATCGTT GTCACATAAT AGAATACATA GATCGGTCTT GGCTTCGACT
TCTGCCGACC ACACCGTCAA GTTGTGGGAT TTGAACAACG GCACTGCCGT CAGATCGTTG
AACACTATCC ACAACAACAA AACTGTAGCA TCTTCTCAAT GGCATTCGCA GGAAGCTTCG
ATCTTATTGA CTGGTGGTTA TGACAGCACT GTAGGCATTA CTGATGTGAG AATTTCTGAT
GCCTCTAGTA TGACCAAAAG CTACAATGTA GCACCTGGTG AAGAGGTCGA AAACGTCCAC
TGGGGCCATT CTTCAGTACC AGAGATTTTC TACGCTGGTA CAGACAGTGG TAATGTCTAT
TGTTTCGATG TCAGACAGAT GGAAAAACCA TTGTGGACTT TGCATGCTCA CGACTCTGGT
ATCTCTTCCT TGGATGTTAA CGCGCACATC CCAGGAATGT TGATTACCAG TGCCATGTCC
GAAAAGACAG TCAAGCTCTG GAAGGCTCCT GTTGAATCTG GCAAGGGTCC ATCCATGGTC
TTGTCTCGTG ACTTCGGTGT AGGTAATGTA TTGACAACTT CTTATGCTGG AGACATTGAA
GTGGCTGGAA ACTTGACAGT TGGTGGAGTC AGTGGAGCCT TGAAGATGTG GGACTCGTTT
TCCAACAGCT CTGTTCGTAA CTCTTTCCGT GATGAATTGA GACAACTCCA ACGTCTGGCA
AGAGACGAAG CCAAACAGGT TGGTCGTGCT TCGAGAATTG CAAGAAAATA CCAGGGCTCT
ACCGGAGAAT CTGTCATGAC TGTTGAAGCC GGTGGTTTGG AAGATGACTC AGACTCTGAT
GGCGAAGATG CCAACGACGA CATGGAAGAT GAAGATTAAA ATCTTCTTCA ATTACCTCAC
CATTATCATA CGATCATATG TGTATATTAG TAATAGCAGC TTATATAGAA TGCATTATCA
CTTAACTAGA TAACTGATTT TTCACAATAG ATTCTTGGGC TAT
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| Protein sequence | MISSSAWVPR GFASEFPEKY ELDDEEMERI TAMAKLELAD AKEDLHEAQV EAGETDKLGD
QIDLDDDLKE YDLENYDNDG ADSEGEEVTM FPGLSSEAKF HKEDGEGSDP YLTLPTETDL
QEEKKESQIY PTDNLVLATR TDDDVSYLDV YVYDDGAGAP DGAEEEEEDK LDADVAKGMV
RDSNLYVHHD IMLPAFPLCV EWINFKPGSE DGSNVGNFAA VGTFDPQIEI WNLDYIDKAF
PDLILGEPDA NSFAGAGKKN KKKKKKSQHV TTHHTDAVLS LSHNRIHRSV LASTSADHTV
KLWDLNNGTA VRSLNTIHNN KTVASSQWHS QEASILLTGG YDSTVGITDV RISDASSMTK
SYNVAPGEEV ENVHWGHSSV PEIFYAGTDS GNVYCFDVRQ MEKPLWTLHA HDSGISSLDV
NAHIPGMLIT SAMSEKTVKL WKAPVESGKG PSMVLSRDFG VGNVLTTSYA GDIEVAGNLT
VGGVSGALKM WDSFSNSSVR NSFRDELRQL QRLARDEAKQ VGRASRIARK YQGSTGESVM
TVEAGGLEDD SDSDGEDAND DMEDED
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