Gene PICST_66478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_66478 
Symbol 
ID4851392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1692895 
End bp1697632 
Gene Length4738 bp 
Protein Length1562 aa 
Translation table 
GC content42% 
IMG OID640393100 
Productpredicted protein 
Protein accessionXP_001387966 
Protein GI126274472 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAATTTCCAT CGCTGGCAGC CTCTTTTTGC TTCTTTCTTT CTGACTCCAA TGGACGTCTC 
CACCCGACCA GAGGTGGCTG CACCGTATCT GCCCAACAAC GGCTCTGTTA CCAGTGCCAT
GAAGCTGAAT ATGACGGGTC ATATAAGCTC CAATAACACG AACGGCATCA GTAACAACAA
TATTAGCAAC AACGACAATA TTGCCAGCAG TACCAACGCG AGTAAGACAT CCAACGTCAA
TGGCAGTGTG GCCAGTAGCT TCCACGACAA CAATGTGGCT AACATCGACT CGACTTCTAC
CAACAATTCT ACGAAGCTTA ATTCCTCTCA ACGCTTCAAC CAATCGTATG GTGGCAGTCC
TTCTTCCAGC TCCAGCAACA GCAGTTCCAG CACCAACAAG CCGAATGTGA CTCCCAACAG
TAGCAACCAC AGCAACAATG TCGACAACGT GATCAACAAC AATCTCAGCA ATCTTGCCTA
TTCGTACCAG CCTAAATCGC CTATAAGTAA TTCTCAACTT ATCAACAGCA ACACAGCTTC
TCCGAACGGT TCCAGCATCT ACTCGCCTGT TACCAACAGG GACTCGTATA CGCTTAACAT
GACCATCGGC TCTCCCCGGA GAGGGAGTAA CAAGCTCAAT GATGTTCCGC CTTCTGATCC
TCGGTTTGAC AGATCTCATC TCACAGACAA GGAGTTCATC GAACAGCTTA TGTTTGAAAA
CAGAGAACTC CATGCCTTAC TTTCCAAAAA GGAAAACCAG ATTCAGATAC TTCGCGAACA
ATGGACAGTC CCTAAAGGCA TTCCTGTGAC TATCACGTCT AGCTCTGTGG CAGAATTATC
TACAGACTCT CTCGAATCTC CAATTGAAAA GGAAGAGAAG ACCGAAGAAA GAGAAGCAGT
AAAAACAGAA AAACAGGAAA GAGAAATTCA AAGACAGAAA GATAGGCAGC AAAGAGAAAT
CGAAAAAGAA ATCGAAAGAG AAATCGAAAG AGACCGAGTT ATTCAAAAAG AAAAGGAAAG
ACTACAAGAA AGAGAAAAGG AAAGGCAACT TCTTCGAGAA AGAGAACAAA GGAATGCTCC
TCAATCTCCT GGCAGACGTG TCTCCATAAG CAATAGTCCA CTTCCACCTT TGCCAATCGA
TGCCGAACAA CAAAGAGAAG CGCAGAGTCC ACAGAGTCCA CGTGATACAA GAGGCTTGGG
AGAACGTCGT AAGGAACTTA AAGATCAGAA TAAAGATGCT AGAGAGAAAT CAATCCAAGA
GACTGATGAT TCTGAAGACA ATCAAAGAGA TATTTACAAA GAGACTCAGA GAGAAATTCA
AAGTAATCTT CTACGGGAAA TTCAAAAAAG AGAAGCACAA CGAGAAAATC AACGTGACGC
TCACAGAGAA GCTCTTAGGG AATCTCGAGA AAGAGAAAGA GAACAAAGAG AAAGACAAGC
TCAGAAAGAA AGAGAATCTC AAACAGAACA GATTTCTCCT AGAGATGCGC GTAATGAATT
TCCAACAGAT TATCATACCG AAATTCCAAA AGAATCTTTC AACGAAACTC CAAGAATTCA
ACGAGAAAAA GAGTCGCTTC AATCTCTTCC TCTGCCAGAC ATCACTAATG ATCTGCCTGT
GAAGCTGCCT GTAAAATTAA GACAATTAGC ACCAGCAACA CCACAAGATC CTTCTTCGTC
TACCTTTGGA ATTCCTCCGA CTCCTCAACA GGATTTCCCT CCCAACATCA TTACGCCTGA
AATTCCTATG CGATCTTCTA GAAGAAGACG CAACTCTACC GATCCTCCTC CTTCTACCCT
AAACTCTAAT GCCAACAACT CTTCTCAGTC TCCACAGCCT CAAGCTGCTA CGGCAGTTTC
TGTTCTTGCT CAGACTGCTC AACAAGTGGT AATGAAGAAA GCTTCCATTG TATCTATTGG
CTCAACCTCA TCCAGTATTC CATCTGCTAT GAGTAATGTA TCAGCTTCGA CTTCTGTAGG
AAAATTGGCC AATATTGATA AGTCTCTACC AGATATCGAG CCTTCGAAAT CGGCGGCAAC
CAACTCTGAT AAATTGTCCA ACGATTTGCT GACTGCGACG ACTTCATCTT CCAGCTTGAT
CCAACCTCTT CCACCACTTC CAACTTCGCC AATCAGACAT AACACATTCT CTCCACCTAC
GATTGTTCTT CCGGATTCGG ATTCAAGTCC AGAAAAAGAA CAACTTGATA ATTACAGCAT
TGTTTCTCCT GTAGATCTGA AGAATTTCAG TCCTGATCTT GGACAAAATC GAAATTTCCA
GTCTGCTCCG GAAAAGAAGA TGTATTCACA AGCAAGAGGG AGTCAGAGCT CAGGAAGTTT
TAACCAAACC AATCAGTACA ATCAGTACAA ATCGAGAATA AAGCTACCAC CTACTTTACA
GCAGCTGGGT GATTCTTCTG TACCACCACT TCCTCCAGCT CCTCCATCTT TGCCTCCTAT
GCCAGCTTTG CCAGCTCCTC CTACACCTAC TGATGGAGCT TCTAACTTTG GATTGAGATC
TCCAGCTAAC TTGGATACTG GAAATAACGA CTCTGTAGTG ACGCCTAATG TATTTGGGCT
GCAGTCCAGG TTTAACACTC CGCCTTCTCA AGCTACTACC CAATTTTCTA ATACTGATTA
CAGTGCTACG AGGCGAGTTC CTAATACGCC CGATATGTTG GCGAATGGAA AGTTCAACAT
GAAACTCAAC GAAATACCAA ATCCACAGTT GGAGGAAGAC AGTAGAAGCT ATATTTCTTC
TCCAATGCAT GGCTCTTTCA CGCATTCACA AGTTTCTCCG GCTCAATTGA GCACGTTTGA
CAACAACAAC GAAGGAATGA GAACCCCAGC CAATCCAGAT TTCTCATCTG GAGAAACTAC
GTTAAAGCAT TCAAACCAGA CTAACCAAAC TCCAAACTCA AGCTTCCACG TAATGTCATC
AAAGAAGGCA GACGAAGACG ATACTGCGTT ATTTATCAGA CCTGAGGATT TCCAGACAAT
TAACATCTAT GTTGTCAGTA CAATTAATGT TAACTCACTT AACCAGGCAT CCAAGCGTTC
TGATGATCCA AATTGTACTA TTTCTATTCA CGATCGTGAA ACTAATAAAG AGATGTGGAG
AATTAGAAAG ACTTATTCTC AGTTGATTGC CTTTGATGGA GAAATCAGAC CTATTATTGA
ATTCTTTGGT CTCCCGGCAA TTCCTGACAA GTCTCTTTTC CTCTCCAACA CACCCATCAA
AATCGAGCAT CGTCGTGCGG CATTGCAGAA CTACTTCAAT ACGATCTTTA TGATGCCTCA
CATTCCACAT GTTGTTCTTT ATAGAATGTG CCGCTATCTT TCGTTAGATT TCGTAAATCC
TCTTGATGAT TATAAGAGTG GGGCCAGAAA GGAAGGGTTC CTTGTACGTC GTCACAAGGG
TCTTGGATCC AACTGGAAGA TCAGATGGTG CCAAGTTGAA GGCGCATATA TGGAAATCTA
TGAGAATCCG GGGGGGCCTT TGATTGAACA AATCAAGTTG AAAGGTGCCC AGGTGGGAAG
ACAATCTAAT GACAACGTAG CTGAAGATAA GGGATATAGA CATGCCTTCT TAATTATTGA
ATCCCAGAAG TCTTCTAAAT TGTCATCTTC CTTACCAAAG TATTTCTTCT GTGCTGAAAC
GGACGAAGAA AGAGATTCAT GGGTTTCCAC TCTCGTAGAA TTCAACGACC TTAGTGACAT
CACCATGACT TCAGATATGT CTGATTCGAT GTTGGCAACA CCAGCTAGTA ATTATCAAGA
CGAGCTTGAA TATTCAACCA AGAGATATGT TAGCGGAAAC AGCATAACTC CAGGACTGGC
CCATGTGTCG AATTACGATC AAGGTTCATC CTATACCTCA CATTCACAGG AAGACAAAGA
TTCCAAAGAA AGCAAAAAGA ATAAAATGCG AAGTATCTTC CCATTTAGAA AGAATAACTC
ATCCCATAAT CAGTTGTCGA CGGATAGTAT TTTGGATGAA GTCGATTCTA TACCTCCACC
ACCTTATCCT GCTAATAACC AATCGACTCA ACACTATTTG AATCAAATGA ATTTGGATGA
TAATGTTGCT AAGAAAATAT TTGGCAGAGA AATTGAAGAT GCCTACAAAT TATCTAATAC
CGAAACTTTA GGCAGAGTTG TTCCAAGTAT TGTGGCTAGA TGTTTGGACT ATTTAATCAA
AACAGGCTCA ATGTACGAAG AGGGTATTTT CAGATTGAGT GGGTCTGCTT CTACAATCAG
ACAATTGAAG GAGCAGTTCA ATACTCAATT TGACCTTGAC TTGTTTGAGT CTCCTTTGAA
GCCAGATATT CATACAGTTG CTGGTTTATT GAAGACGTAT TTAAGAGAGT TGCCTAGTCC
AATTCTTGGA TTGCATCCAT ATAACCATCT CAATAGTGTC ATATTGCACA ATTCAACTTT
GCCTCCTGTC TCGTTGGCGC TAATTTTCAA AGAGTTTATT AATGATAGAA ACAATGTGGA
CAAGATTCAC TATGATATGT GTTATGTGAT CTTTAAGTTC TTGAGTCAGA TTATTGCCCA
GAACCAGATA AACAGAATGA ACTTAAGAAA TGTTTGTATT GTGTTCGTTC CTACGTTGAA
CATTTCGCTT GAAGTTCTCA GCACCTGTTT GGTTGACTTT GAGTACATTT TCGAGAATGG
CAAGCCTACG CCGGACAAAG ATAGAGAAGT GCTTGACTTG CATATCCCTA ACTTTTGA
 
Protein sequence
MDVSTRPEVA APYLPNNGSV TSAMKLNMTG HISSNNTNGI SNNNISNNDN IASSTNASKT 
SNVNGSVASS FHDNNVANID STSTNNSTKL NSSQRFNQSY GGSPSSSSSN SSSSTNKPNV
TPNSSNHSNN VDNVINNNLS NLAYSYQPKS PISNSQLINS NTASPNGSSI YSPVTNRDSY
TLNMTIGSPR RGSNKLNDVP PSDPRFDRSH LTDKEFIEQL MFENRELHAL LSKKENQIQI
LREQWTVPKG IPVTITSSSV AELSTDSLES PIEKEEKTEE REAVKTEKQE REIQRQKDRQ
QREIEKEIER EIERDRVIQK EKERLQEREK ERQLLREREQ RNAPQSPGRR VSISNSPLPP
LPIDAEQQRE AQSPQSPRDT RGLGERRKEL KDQNKDAREK SIQETDDSED NQRDIYKETQ
REIQSNLLRE IQKREAQREN QRDAHREALR ESREREREQR ERQAQKERES QTEQISPRDA
RNEFPTDYHT EIPKESFNET PRIQREKESL QSLPLPDITN DLPVKLPVKL RQLAPATPQD
PSSSTFGIPP TPQQDFPPNI ITPEIPMRSS RRRRNSTDPP PSTLNSNANN SSQSPQPQAA
TAVSVLAQTA QQVVMKKASI VSIGSTSSSI PSAMSNVSAS TSVGKLANID KSLPDIEPSK
SAATNSDKLS NDLLTATTSS SSLIQPLPPL PTSPIRHNTF SPPTIVLPDS DSSPEKEQLD
NYSIVSPVDL KNFSPDLGQN RNFQSAPEKK MYSQARGSQS SGSFNQTNQY NQYKSRIKLP
PTLQQLGDSS VPPLPPAPPS LPPMPALPAP PTPTDGASNF GLRSPANLDT GNNDSVVTPN
VFGLQSRFNT PPSQATTQFS NTDYSATRRV PNTPDMLANG KFNMKLNEIP NPQLEEDSRS
YISSPMHGSF THSQVSPAQL STFDNNNEGM RTPANPDFSS GETTLKHSNQ TNQTPNSSFH
VMSSKKADED DTALFIRPED FQTINIYVVS TINVNSLNQA SKRSDDPNCT ISIHDRETNK
EMWRIRKTYS QLIAFDGEIR PIIEFFGLPA IPDKSLFLSN TPIKIEHRRA ALQNYFNTIF
MMPHIPHVVL YRMCRYLSLD FVNPLDDYKS GARKEGFLVR RHKGLGSNWK IRWCQVEGAY
MEIYENPGGP LIEQIKLKGA QVGRQSNDNV AEDKGYRHAF LIIESQKSSK LSSSLPKYFF
CAETDEERDS WVSTLVEFND LSDITMTSDM SDSMLATPAS NYQDELEYST KRYVSGNSIT
PGLAHVSNYD QGSSYTSHSQ EDKDSKESKK NKMRSIFPFR KNNSSHNQLS TDSILDEVDS
IPPPPYPANN QSTQHYLNQM NLDDNVAKKI FGREIEDAYK LSNTETLGRV VPSIVARCLD
YLIKTGSMYE EGIFRLSGSA STIRQLKEQF NTQFDLDLFE SPLKPDIHTV AGLLKTYLRE
LPSPILGLHP YNHLNSVILH NSTLPPVSLA LIFKEFINDR NNVDKIHYDM CYVIFKFLSQ
IIAQNQINRM NLRNVCIVFV PTLNISLEVL STCLVDFEYI FENGKPTPDK DREVLDLHIP
NF