| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_6645 |
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| Symbol | |
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| ID | 4851652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2458227 |
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| End bp | 2459201 |
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| Gene Length | 975 bp |
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| Protein Length | 325 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393360 |
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| Product | predicted protein |
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| Protein accession | XP_001386804 |
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| Protein GI | 126275161 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0872317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGGCA AGCTTGGGGT GTGTTCCTTC TGCAATGAGA ATGTAGCCAA GTACAAATGC
CCGAAGTGCG CTGTAGCATA CTGCTCTTTG GGATGTTTCA AGAGTGAAAG CCACAGAGAA
ATGGATTTGA AAGTAGCACA TGTAAAAGAT ATTCACCAGA AACCGAAAGA CGAGACTTAC
GACGAGGTTG TTAATTCTAA CCGAGAACAA TCCCCAACAA ACAGAATTTT CCAGAAAATC
GCCCAGGACC CAAAAATCAG AGCCATGTTA AAATATAATT CTCTACAATT GCATCTTTTG
ACCTTGATTA AGATTTTGGA TGATCCCACC TTGTTCAAGT CTACTAACGA GCAAATCTTT
ACAACCGAAA ACAAGCATGC CATGATGAAT CTAAAGCTTA ATGATCTACG CGCCGGAGGC
ATTGAGCAAA ACGAACTAGT AGAAGAATTC ATCCTGCGAG TTGCAGAATT GTATGAAGAG
TACCTGGAAG CAGAAGTTTC AACATGATTC TAACAAGTAG TTAAATATTA CCAGGATGCG
ATGCAGGGAT CCAACTTACA GTAGACTGTT ATGTAGGGCA ACAGGTTGCC AAATGGTGGG
CGGCAGAGTG GGTTCGTGAA TGTTTCCATA CTCCATCATG TCTTTGGCGT AGAGCGGTTT
CAATAGAAAC TCTACTTCAG CACGCGTCCC TCCACCTACC TTAAATTGTG CATAGACAAA
GCACCTCAAT AGGTAGATGT GAATATTTCA GATCATGAAA ATACAATTAG CCAAAC
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| Protein sequence | FFNNANLVSL SLGNMKSSLK PSLMSLAPVN SMRSNIQILQ SSMNPLLRVT SISVSHTKRT
MVSSSRRLAR NDTWTRYNRY YKNTRWNKLK GPAIFTALFC IGTTIATPYL FDYTPLAYFK
RHPSNFVYAL IALNGGVFLM WRVPALSRFV HKYAIVVKDR LQTNWAMLGS SFSHQSFMHL
FVNMFVLQSF GTSLAVTVGV ANFTVLYLNA AVLSSFVSIA IPTLMRSSLA SASLGASGAI
FAVMGAFSYL FPHAPIGFFF IPIPGGAWTL FLGLTGWNIA GTILRWGTYD YAAHLGGSIV
GIFYGWWFNK KRQEAFERRR SSFRF
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