| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53682 |
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| Symbol | |
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| ID | 4851676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2508970 |
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| End bp | 2511114 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393384 |
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| Product | predicted protein |
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| Protein accession | XP_001387054 |
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| Protein GI | 126275232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5191] Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCAT CAGCTTCCAC ACTAGCTCCT GTGCAAGTCA CAAGTGAACA GATCTTGCTG
GATGCATTTC AGAGCCGAGA TAGGCCTCTA GAGAGACCCA AACAGTCAAT CCAAGATCTT
GAAGAACTCC GATCATTCCA GCAGAAGAAG AGAAAAGAAT ACGAACAACA GCTCAACAAA
AACAGGTTAA ACTTTGGACA GTTTCTACGG TACGCAAAAT GGGAAGTCAA CCATAACCAC
GATTTTCCCC GGGCTCGTTC TATTCTTGAG CGGGCTCTAG ATGTCAATGT TCAACATGTG
CCGTTTTGGG TTCAGTATAT ACAACTCGAA CTTTCGCACA AGAATGTCAA CCATGCCTTG
AATCTTCTTG ATAGAGCTAC CACTACCTTG CCACGAGTCA ACAAGTTGTG GTTTCTTTAC
GTTCAGACGT TAGAGACGTT AAAAAACTAC CAGTTAGTGA GGAATGTATT TGAGAGATGG
TTGAAATGGC ATCCTGATTC ATCAGCCTGG GAAGCATATG TAAATTTTGA AAGGCGGTAT
GATGAATACG ATAATGTTAG AACAATTTTC TCTCGTTATG TTCAAGAATA TCCTTCTGCA
CAAGTCTGGC TCAAATGGAT AGAATTCGAA ATGTTTGCTG GAAGCCTTTC CCAGAACACT
GAAACTTCAG TTCAGAATAT AAGAGTAGTT TATGAACAGG CAGTGGATAC AATTATCAGC
GATAAAAGGA TCAGAGATGA CCCTGAGTTG CCAGCTATTA TAGCCAACTG GGCAGATTGG
GAGATTTCGG TTAAGGAGTA CGAACGAGCC AGAGCCATCT TCGTCACTTT GTTAAATGAA
AACAGCAAGA TCAAACTTCT GAAACAACAA AGACTGCAAA TCTCTTCCTC GTTTACTACT
TTTGAAAAGA GACATGGCAA CAAGGATTCG ATCGAATCAT CTGTGCTACA GAAGCGCAAA
TTAAGACATC AAGAGAATAT AGAGAAAAAT CCCCAAGATA TAGATTCGTG GTGGTCATAT
ATTCAAATAG TACAACTGGA GAATAATATC GAAGAAACAA GAAACGCCTT CAAAGGGGCA
ACTTTTAATG TGCCTTCATC CAAGACCAAG TCCATTCAAT GGAGACGTCA TATCATGCTA
TGGATCAAGT ATGCGTTATG GGAAGAGTTT GACAATGAAG ATATCACGTT GGCCAGAGCT
GTTTGGAACG AGTGTCTAAA GGTGATACCA CACAAGAACT TCACATTTGC CAAAGCATGG
ATCCATTTTG CAGAATTTGA ATTGAGAAAT AATGAAAGTG AAGAAAGCCT ACAGACGGCT
CGAAAGATTC TTGGTAGAGG GATTGGTCAG TCTTCTGTTT CCGGACCCAA AAGGAAACTC
TTCGCCTACT ATATTAGTTT GGAAAAAAGG TTAGGCGAAT GGGATAGAGT CAGAATGCTC
TACGAGAGGT GGTTAGAAGT AGCGACACTG ACCGGTACTA GTTCCATTCC TGTTGTTCTT
GAATACGTTG AATTCGAAAA GTCATTAAAT GAGATTGACA GAAGTATATC TATCTTCCAG
ATTGCTTTAG AACTCTCTGA AGATGCAAAA ATTTCGTCCA GTTTTGAACC TGTGGAGACA
ATTTGGATTT CGTTTATCAA TTTTTATAAA GAGGAGTTGA AGTACGACGA CGCAAGATCG
TTATATCGCT TGTTGTTAGA GAAGATGGAC AGCACCAAGG TGTGGATATC ACTTGCACTT
TTTGAGTCTT CCATTCCTTC ATCTCGTCAA TTGATAGAGT ATGAAGAGAG CAACGCCGAT
GAATTCGAGT TTTCCGTAGA AGATGAGCAC AGAGAAAATA CTAGAGCTGT TTTCAAGGAA
GCTGAACTAC ACTTCAAGAA TATTGATTCT AAAAACGAGA GACTTGTCAT TCTTGAATCG
TGGAAAAGCT ATGAAAAATT GCATGGAAAT AACGAGAGCC TAGCAGATAT CACCAAGAAG
TTGCCTACCA TTGTGAAGCG AAGAAGAACC GTTGATGGTG TAGACGAAGA ATACTTGGAC
TATATATTTC CTGAAGACGA GTCGAGCGCC GCTAAAGTTC CCGGAATCAG CAAGTTCTTG
GCGAATGCAA AGAAATGGGC TGCTCTACTG TCTCAGAAAA TGTAG
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| Protein sequence | MDSSASTLAP VQVTSEQILL DAFQSRDRPL ERPKQSIQDL EELRSFQQKK RKEYEQQLNK
NRLNFGQFLR YAKWEVNHNH DFPRARSILE RALDVNVQHV PFWVQYIQLE LSHKNVNHAL
NLLDRATTTL PRVNKLWFLY VQTLETLKNY QLVRNVFERW LKWHPDSSAW EAYVNFERRY
DEYDNVRTIF SRYVQEYPSA QVWLKWIEFE MFAGSLSQNT ETSVQNIRVV YEQAVDTIIS
DKRIRDDPEL PAIIANWADW EISVKEYERA RAIFVTLLNE NSKIKLLKQQ RLQISSSFTT
FEKRHGNKDS IESSVLQKRK LRHQENIEKN PQDIDSWWSY IQIVQLENNI EETRNAFKGA
TFNVPSSKTK SIQWRRHIML WIKYALWEEF DNEDITLARA VWNECLKVIP HKNFTFAKAW
IHFAEFELRN NESEESLQTA RKILGRGIGQ SSVSGPKRKL FAYYISLEKR LGEWDRVRML
YERWLEVATL TGTSSIPVVL EYVEFEKSLN EIDRSISIFQ IALELSEDAK ISSSFEPVET
IWISFINFYK EELKYDDARS LYRLLLEKMD STKVWISLAL FESSIPSSRQ LIEYEESNAD
EFEFSVEDEH RENTRAVFKE AELHFKNIDS KNERLVILES WKSYEKLHGN NESLADITKK
LPTIVKRRRT VDGVDEEYLD YIFPEDESSA AKVPGISKFL ANAKKWAALL SQKM
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