Gene PICST_53561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_53561 
Symbol 
ID4851817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2909385 
End bp2909834 
Gene Length450 bp 
Protein Length149 aa 
Translation table 
GC content46% 
IMG OID640393525 
Productpredicted protein 
Protein accessionXP_001387124 
Protein GI126275691 
COG category[S] Function unknown 
COG ID[COG2938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.793096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGAA ACAGAATCAC ATCAAGAAGA TCCATCAGCT CGTCTGTTTC GGCTCTCGCC 
AATTACGGGA AGCCTCAAAA CCCGGCTATT GACACCACAG TGAAAATGAG AATCCAGCCC
ATCAAGAGAG AAGGAGAAAC CATGGAAATA AAGAGAGCTA GGTTGATCTA CCAGCTGAGA
AAGAGAGGCA TTTTGGAAAG CGACTTGCTT CTCTCCCGTT TTGCTAAAAA GTACTTAAAC
GAGTTCACCG AGGCTGAACT AGACGAATAC GACAGATTGT TGGACGAGCC AGACTGGGAC
ATCTACTACT GGGCTACAAA GAACTACGAC GTTACTCCTT TGCCAGACAA GTGGAAGGAC
CTGAAGATCT TGAAGATGTT GCAGGAGGAT GCTAAGAATG ATGACAGAGA GATCTTGAGA
ATGCCTGAGT TGGACTTGGA GCAGAAGTAG
 
Protein sequence
MLRNRITSRR SISSSVSALA NYGKPQNPAI DTTVKMRIQP IKREGETMEI KRARLIYQLR 
KRGILESDLL LSRFAKKYLN EFTEAELDEY DRLLDEPDWD IYYWATKNYD VTPLPDKWKD
LKILKMLQED AKNDDREILR MPELDLEQK