| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53364 |
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| Symbol | GEF1 |
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| ID | 4851755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2751593 |
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| End bp | 2753887 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | |
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| GC content | 42% |
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| IMG OID | 640393463 |
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| Product | voltage-gated chloride channel |
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| Protein accession | XP_001387093 |
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| Protein GI | 126275502 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTAG AGTCTGAAAT AATAGAGACG GTAGAGGAGT CTGACTCTGG GCGTCCACAT
CAATTCCGAA GTCGAACGAC TGGAGATTGG CTCAACCAGG ACGGAATCAA GGAAGTCAAA
AGGTTTAACG ATTTCCGAAC TATCGATTGG GTAGAAGATG AATTGGACGA GCACAAGAAG
AGATTGATGA AAAGGAAACA TGTGCGTATA GGCACAAGTT CATTTAAGGA TCGTTTGCTT
GTTGTGACAC AGAACTGGAT CCTTCTCGCT GCCATGGGGA TCACTATAGG GTTGATAGCC
GGCTGTTTGA ATATCATTAC AGCTTGGTTG GGTAGTGTTC GCGTAGGACA TTGTTCACTG
AACTTTTATT TGAGCAAAGC ATTCTGCTGC TGGGGCCAAG ACGAGGAAAA GTGTCAAGGC
TGGAATTCGT GGTCTCTGTA CACGTTTTTC AATTATTTGA TGTACGTAGG GATATCGTTG
TGTTTTTCTA CCACTTCAGC TGTATTGGTA AAGCACTACG CTCCTTCTGC AGCCGGCTCA
GGCATCTCGG AGATCAAGTG TATTGTGTCT GGGTTTGTGA TGGAGGGATT TTTGGGGTGG
TGGACGTTGT TGATAAAATC CATAGGTCTA CCTTTGGCTA TTGCTTCTGG CCTAAGTGTA
GGAAAAGAAG GTCCCAGCGT TCATTATGCT GTCAGTGTAG GTAACTCGAT AGCGAAATTG
GTGCAGAAGT ACAGAAAGAG TGCTTCTAAG GCCAGAGAGT TTCTTACGGC TACTTCTGCT
GCCGGTGTGG CTGTAGCGTT TGGTTCTCCT ATGGGAGGGG TGCTTTTTTC CATTGAAGAG
ATTTCGTCTG TATTCCAGTT ATCCACTATC TGGAAGTCAT ACTTTTGTTC GTTGATAGCT
GTGGCAACGT TGGCTGCAGT TAACCCATTC AGGACAGGTC AATTGGTTCT TTTTGAGGTT
ACCTATGATA CCCAATGGCA CTACTTCGAG ATTCCGCTCT ACATAATATT AGGTATATTC
GGGGGTGTCT ATGGAATTGT TGTCTCTAAG TTCAACATCA GAGTAGTCGC TTTCAGAAAG
AAGTATTTGG GCAATTTCGC AATCCGAGAG GTGTTTATTC TTTCGTTGTT CACAGCTAGT
TTCAGTTATT TCAACGAATA TTTGAGATTA GACATGACTG AATCTATGCA AATTCTTTTC
CACGAGTGCG ATGTAAAGTT CAGTCATTCT ATATGTGATC CTAACTCCAA AAAGACACCT
ATACTTGCTT CCTTGATATT TGCCACCATC GCAAGAATGG GATTGACTAT TATTACCTAC
GGTTGTAAAG TTCCCGCAGG TATCTTTGTT CCATCCATGG CTGCTGGTGC CACCTTCGGG
CGTGCACTCG GAATTATTGT AAACTATTTC TACCAAGAAC ACAAAGATTC ATCTATCTTC
CTGACTTGCC CAGCTAATGG CCGCTGTATC ATTCCAGGTA CATATGCCTT CTTAGGAGCT
GCAGCCGGCT TAAGTGGTAT CACAGATCTC ACTGTAACAG TAGTGATCAT TATGTTTGAA
TTGACGGGAG CCTTGAGATT CATCCTTCCA ACAATGATTG TAGTTGCGAT CACCAAAGCC
ATAAACGACA AATGGGGACA TGGTGGAATT GCTGATCAGA TGATTAAGTT CAACGGCTTA
CCGCACATAG ACGCCAAGGA AGAGTTCACC TTTGATACGA CAGTGGAAAG CGCCATGTCT
ACTGTAGTTG TAACATTTCC CTGTGATATC CAGGAGGCTA TCACTTTGGA ACAGTTGAAA
CAGACTTTAT CCAAAACAAC ATTTAGGGGC TATCCTCTTA TTCAATCGTC AGCAAATCCC
AAAATCGTCG GATTTGTGTC CAGAGCAGAT TTGGAATACG TAATCCACAA TTACGATGGA
GTCAGCGACA CTACAAAATG TAATTTCAGT AACACAGATA GAAGTGACTC TATGATTGAC
TTTAAACCAA TACTAAACAG ATCCCCTTTG ACAGTTAACA TCGATTGTCC GTTAGAGTAT
GTCTTGGAGG TATTTGTTAA AATGGGACCC AGATACATAC TAATCGAGAA TGAAGGTAAT
TTAGTTGGTA TAATCACTAG AAAAGACATT TTGCGATTTG AATATTCATT ACATTCTCTT
CACACGAACA CATTTGAACA ACAGCTTCAC GAAGCGTTTG ATGCCAAGGT ATGGGAAATC
ATGAACTACT TCTCGCGTGG ATTACGGAAA AACTCCGGAA GACTTCTCTA CAACGACGAG
AACAGGTTTA TGTAA
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| Protein sequence | MSLESEIIET VEESDSGRPH QFRSRTTGDW LNQDGIKEVK RFNDFRTIDW VEDELDEHKK
RLMKRKHVRI GTSSFKDRLL VVTQNWILLA AMGITIGLIA GCLNIITAWL GSVRVGHCSL
NFYLSKAFCC WGQDEEKCQG WNSWSLYTFF NYLMYVGISL CFSTTSAVLV KHYAPSAAGS
GISEIKCIVS GFVMEGFLGW WTLLIKSIGL PLAIASGLSV GKEGPSVHYA VSVGNSIAKL
VQKYRKSASK AREFLTATSA AGVAVAFGSP MGGVLFSIEE ISSVFQLSTI WKSYFCSLIA
VATLAAVNPF RTGQLVLFEV TYDTQWHYFE IPLYIILGIF GGVYGIVVSK FNIRVVAFRK
KYLGNFAIRE VFILSLFTAS FSYFNEYLRL DMTESMQILF HECDVKFSHS ICDPNSKKTP
ILASLIFATI ARMGLTIITY GCKVPAGIFV PSMAAGATFG RALGIIVNYF YQEHKDSSIF
LTCPANGRCI IPGTYAFLGA AAGLSGITDL TVTVVIIMFE LTGALRFILP TMIVVAITKA
INDKWGHGGI ADQMIKFNGL PHIDAKEEFT FDTTVESAMS TVVVTFPCDI QEAITLEQLK
QTLSKTTFRG YPLIQSSANP KIVGFVSRAD LEYVIHNYDG VSDTTKCNFS NTDRSDSMID
FKPILNRSPL TVNIDCPLEY VLEVFVKMGP RYILIENEGN LVGIITRKDI LRFEYSLHSL
HTNTFEQQLH EAFDAKVWEI MNYFSRGLRK NSGRLLYNDE NRFM
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