| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53135 |
|---|
| Symbol | |
|---|
| ID | 4851667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 2495908 |
|---|
| End bp | 2497221 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | |
|---|
| GC content | 42% |
|---|
| IMG OID | 640393375 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386813 |
|---|
| Protein GI | 126275206 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0768437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAATG AACAAATCCC ATTGGATTCC CGTATTGTTA TAGTTGGTGC CGGTACTTTT
GGACTTTCCA CCGGTTTGGA GCTTTTGAGA AAAGGGTACA AGACTGTTAC TCTTGTTGAT
CCTTACCCCC CTCCATCCCC ATTAAGTGCT GGTAACGATG TCAACAAGAT AGTCCAGTCC
ACCGTTGATA ACAAGTTTCT TTCGGAATTG GCGTTGGAAG CTTTACAACT TTGGAGAAAT
GATCCAATCT ACAGAGATGC GTTCCACGAG ACTGGAATTA TCTACGCTGC TACAAACGAA
AAGATACACG ATATTCAGGA TAGAAGAAAG AGGTTGGAAA AATTAGGAAT TGAGCACTCG
GCCTTGGATG GGTCACAAGA TTTTGCCAAA GTTATTCCAA GTTTGACTGG GTCAGATGAT
AATAGTTCTA GATTCAGGAA TTGGGTAGGT TTCCACCAAA AGAAGAACTG TGGATGGGCT
TTTGCCAGAT TGGCATTGGA ATTTGCTGCG AATGAAATCA GAAAATTGGG AGGGCAATTC
GAAATAGCCA ATGTTGAGGA ACTCGTGTTC AACCAAGATA CGGTAATTGG AGTGAGAACA
ACTACTGGCC AGGTAATCAA AGGTGACAAG GTGGTGATTT GTGCGGGAGC CAAATCGGAC
CAGATCTTGG ACTTCGAAAA CCAGCTATTA GCCAAATGCT TTACGGTAGT TCATATTGAG
CTTTTGCCGT GTGAGGTTGA ACTGCTTAAA AACTTGCCCG TAGTATTGAA TCTTGATCAA
GGCTTCTTCT TTGAGCCCGA TAAGAAAAAT CATTTGAAGA TCTGCAACGA ATTTCCTGGC
TACATAAATT TTTCAGAAGA CTCGACAATT TCCAAACCGG TATATCTTGA TAAAATCCCC
CAGGAAGCCG AAAAGCAGAT TAGAATATTC TTAAAAGAGA CATTCCCAAA TCTATCAGCT
CGCCCATTTG CGGTGACAAA AATATGTTGG TGCACAGATA CTTCCGATAG GAACTTCCTT
ATTGGAACGC ACCCAAAGCA CAAAAACCTA ATTCTTGGCA CGGGAGATTC TGGACAAGGC
TTCAAGTATA TGCCAGTAAT TGGAAAATAT ATAGCCAGCG TGGTGTCGAA CGGACCAGAA
AGTCTACCAC CGGATATAGA ACGGTTTTGG AGATGGAGAC CAGAGAGTAC GACTAACAGA
GATGTCTACG ATCTCCAGAA CAGGTATGGT GGATCTAATC AGGTGAAAAA TTTGCTAGAC
ATCAAGCATT GGAGCAGCAG TAAAAATAAT AGTAGTGATG CGGCCAAGTT TTAG
|
|---|
| Protein sequence | MVNEQIPLDS RIVIVGAGTF GLSTGLELLR KGYKTVTLVD PYPPPSPLSA GNDVNKIVQS
TVDNKFLSEL ALEALQLWRN DPIYRDAFHE TGIIYAATNE KIHDIQDRRK RLEKLGIEHS
ALDGSQDFAK VIPSLTGSRF RNWVGFHQKK NCGWAFARLA LEFAANEIRK LGGQFEIANV
EELVFNQDTV IGVRTTTGQV IKGDKVVICA GAKSDQILDF ENQLLAKCFT VVHIELLPCE
VELLKNLPVV LNLDQGFFFE PDKKNHLKIC NEFPGYINFS EDSTISKPVY LDKIPQEAEK
QIRIFLKETF PNLSARPFAV TKICWCTDTS DRNFLIGTHP KHKNLILGTG DSGQGFKYMP
VIGKYIASVV SNGPESLPPD IERFWRWRPE STTNRDVYDL QNRYGGSNQV KNLLDIKHWS
SSKNNSSDAA KF
|
|---|
| |