Gene PICST_53121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_53121 
SymbolMNN23 
ID4851606 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2312480 
End bp2313994 
Gene Length1515 bp 
Protein Length485 aa 
Translation table 
GC content38% 
IMG OID640393314 
ProductGolgi alpha-1,2- mannosyltransferase 
Protein accessionXP_001386787 
Protein GI126275016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0568991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.285828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCACATCAAT TTTGGTATGA AGTCTTCTCC ATTTTTAAGA ACAACAGATT TGAGTTGGAA 
GAAGATCAAA AACTAATTAG AATTGTTCCA AAAGACCAAC AACTCAAACC TAAGAGTAGA
ACGAAAGAAG CTCTTCTTGG AAAAGCCGAA ATCTCAAAGG ACAGTATGAA GCAATTAAAG
GAGAAGCACC TGAATATTTT TAAACAATTG CCGAACAATA TCGATACATC TACCTACAAA
AAGGGTTCCA GAGGTGTTGT GATGGTTGGA GGTGGTTTCT ACTCGTGGTT GTCGTATTTG
TCTATTTTGC AAATAAGACA TACAGGTTCC AATTTACCAG TAGAAGTCGT CATACCTACT
TATGGAGACT ATGAAAAGGA AAAGGACTTC TGCGAAACCA CTTTAGCCAA ATTGAATGCT
AAGTGTGTTA TCCTTCCAGT CAAGTTAGGA ACGGCTGTAG TCAGAGATTG GTCGTTTAAA
AGCTATCAAT TCAAGGCTGT AGCTTTGGCA ATCTCATCGT TTCAACATGT TCTACTCCTT
GATTCTGACA ATGCTGTTGT TTCAAATATC GACAAGTTGT TTGACTCACA GGTTTACAAG
AAAAATGGTC TTATCCTCTG GCCAGACTAC TGGAGTCGAA CTGTATCCCC TCTTTTCTAC
GATATCGCTA ACGTAAGTGT TGTCGAGAAT ACAAGGGCTA GATGGCACCG ATTCCCGCTT
TTTTCTGAAG AGAGTCTGAT GCCAGAGGGT GAGCAGAATT TCCATGAATT GAAGGGCACT
TGTTCTGATT TATCAACTGA GTCGGGACAG CTATTAGTGA ACAAGAAGAC GCATGCAAAG
ATGATACTTC TTTCTTTATA CTACAACGTC TTCGGTAATG AAGTATATTA TAAACTTTTT
GGACTAGGAG AAATTGGAGA AGGTGATAAA GATACTTTTA TGACAGCTGC AGTTGCAGCT
GGAGCAAGCT ATTATCAAGT TAAGGGATAC ATTCATACAT TTGGGTACCT GGACAAAAAA
GGGTATCATG GGATGGCAAT GGGACAGAAG GATCCTATTC AAGATTACAA TACATGGCAA
AAGGAATATT CAAATGTACA GAAATATCTC AGAAAGAATA AATTGCATTG GAATATCACC
CAACAAGAAG AGAAATTAAA GGAACTCGAA GAAAAGTATT TTACTGGCAG TATTAAGGGA
ATCGATTTAT TCTCCTTACA TTGTAATATT GGTAAAATTG ACCCAATAAG TTACATGAAC
AACGACGATC TTAATGAGGG TATGAACAGA ATGAACCATA GAATGTATGG CCATTACTCG
TATAAATCTG GTGAAAAGCA AGTAGATTTT GAATGGAGAA GGTGGTCAGA CATATATAAT
GCATTGTGTG TCAACAAGAT TATTCCCTTT CTTTACGGCA AGGACAAGGC CAAGGACTTG
GACGGGGCTT GTGAATACAT TTCTAACACT GTGAATTGGT TGGCCCTGAC ATCAAAAACA
GTTCAAACAC ATTAG
 
Protein sequence
SHQFWYEVFS IFKNNRFELE EDQKLIRIVP KDQQLKPKSR TKEALLGKAE ISKDSMKQLK 
EKHLNIFKQL PNNIDTSTYK KGSRGVVMVG GGFYSWLSYL SILQIRHTGS NLPVEVVIPT
YGDYEKEKDF CETTLAKLNA KCVILPVKLG TAVVRDWSFK SYQFKAVALA ISSFQHVLLL
DSDNAVVSNI DKLFDSQVYK KNGLILWPDY WSRTVSPLFY DIANVSVVEN TRARWHRFPL
FSEESLMPEG EQNFHELKGT CSDLSTESGQ LLVNKKTHAK MILLSLYYNV FGNEVYYKLF
GLGEIGEGDK DTFMTAAVAA GASYYQVKGY IHTFGYLDKK GYHGMAMGQK DPIQDYNTWQ
KEYSNKLKEL EEKYFTGSIK GIDLFSLHCN IGKIDPISYM NNDDLNEGMN RMNHRMYGHY
SYKSGEKQVD FEWRRWSDIY NALCVNKIIP FLYGKDKAKD LDGACEYISN TVNWLALTSK
TVQTH