| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53118 |
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| Symbol | SYA1 |
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| ID | 4851899 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 3133812 |
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| End bp | 3135152 |
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| Gene Length | 1341 bp |
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| Protein Length | 430 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | 640393607 |
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| Product | Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) |
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| Protein accession | XP_001386929 |
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| Protein GI | 126275956 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.523739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTACGG TTTCGTCTAC TATTGTAGGT GCATTAGCCT GTCAAAGAAA CTCCTTTCTC
AAAACTTTCA AGACCCAGGT GGTTTCCAGT TTTGAATATG TTCCTCCACC CAGTTCTCGT
GACAAGCAGA ATAAGAACAA AAAGGTAAAG GACGAAGCTC CCAAGGAAAT TAAGTATGCC
GTAGAACTAG AAGATACAAT TTTGTTCCCT GAAGGTGGCG GTCAGCCTTA TGATAAGGGT
TCATTGACTT TACCCAACAA CGAAGTCGTT CATGTAACTA GTGTATTAAG AGACAAGTTA
ACGGCTTTGC ATATCACGGA TGCTCCCGTA GAACCAGGCA CCGAGGTCAC TGTGGATTTG
GACTGGGATA GAAGAATTGA CTTGATGCAA CAACACACGG GTCAACATTT GTTATCGGCT
GTTTTTGACA CCTACAAGTT GGAGACGTTG AGTTGGTCGA TGGGAGAAAT CATTAACTAC
ATCGAATTGC CCGAAAAGGT CAGTGATGAA ATCGTAGCTG AGGTTAATGC CAAGGTGAAC
AAGCTTATAT TTGAAGCTAT TCCCATTGAG GTAGTAACTC CCGATCAACA TGGTGGAGAA
CTCGACTACT CTCACATTCC TGATGACTAC GACTTGTCTC AAGGAATCAT TAGAATCGTC
AAGATTGGGC AGTTGGACGC TAATCCATGT TGCGGCACCC ATTTGTCGTC AACATCGCAG
ATTCAGTCTA TGTCGCTTTT GCACCAGGTT AGTGTCAGAG GTGGCCATTC TAGATTGTAC
TTCATCTGTG GAACGCGGGT GTACAAGTAC TTAAGCAAGC AACATGAGCT CTTGAAGCTT
GTCTCAGGCA CTCATTTGTC GTGCCAGATC GAAGAAGTTG CCGACAAGGT TGCTCTTTTG
AACTCCAACT ACAGGAAGGC CCTTTCTCGT GAACAGAACT TGCTCAAAGA ACTTGCGGCC
GACGAAGCTA GCCGGATCTT CACCAGATTC AAAAACACAG ATGCTAAAGT CGATTACGTC
TACAGAGCCG AGAACAGCCC GGAATTCCTC ATATTGGTAC AGAAAGAATT GACCACTTTA
ATTAACAGTG ATAAAGAATC AGGTGTCAAC GTTACTGACG CCCAGACTGT AGTGTTGTTC
AATGGAGACT ATCCTTCGGG TACTGGAGGT ATGGTAAAGA TTCTTGGTCC ACAAGCCGAG
GTCCTTCAAT CGGAGCTCAA GAGCAAGATC AAAAACTTGA AAGGTGGAGG AAAGGGAAAT
TCATTCCAAG GGAAGATAGC CAAGTATGAA AAGGGAGAAT TGGAAACGCT ATTCACGTAC
TTGGACACCT TCCGAAACTA A
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| Protein sequence | MTTVSSTIVG ALACQRNSFL KTFKTQVVSS FEYQNKNKKV KDEAPKEIKY AVELEDTILF
PEGGGQPYDK GSLTLPNNEV VHVTSVLRDK LTALHITDAP VEPGTEVTVD LDWDRRIDLM
QQHTGQHLLS AVFDTYKLET LSWSMGEIIN YIELPEKVSD EIVAEVNAKV NKLIFEAIPI
EVVTPDQHGG ELDYSHIPDD YDLSQGIIRI VKIGQLDANP CCGTHLSSTS QIQSMSLLHQ
VSVRGGHSRL YFICGTRVYK YLSKQHELLK LVSGTHLSCQ IEEVADKVAL LNSNYRKALS
REQNLLKELA ADEASRIFTR FKNTDAKVDY VYRAENSPEF LILVQKELTT LINSDKESGT
VVLFNGDYPS GTGGMVKILG PQAEVLQSEL KSKIKNLKGG GKGNSFQGKI AKYEKGELET
LFTYLDTFRN
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