| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_53063 |
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| Symbol | |
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| ID | 4851656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 2466183 |
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| End bp | 2468876 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393364 |
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| Product | predicted protein |
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| Protein accession | XP_001386806 |
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| Protein GI | 126275175 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5047] Vesicle coat complex COPII, subunit SEC23 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.214435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA AATTCGCCCA TTTGGAGGAT GTAGATGGGG TAAGGTTCAA TTGGAATTTG
TTTCCCTCCA CGCGGCTAGA AGCCTCCCGC TTGACCACAC CTTTGGGATG TCTCTATACT
CCCTTACATG CCAGAAGTTG CAATTTATTG CCAATTCCAC AACTAACAGC AAATCCACTC
TCTTGCGACA CTTGTGGCAA TTACGTAAAC CCATATATCA AACTCGACCG TGCCAATGGC
ATGTGGTGGT GTCCTTTCTG TGAAAAAAGA ACTTCCATAC CAAAAGATTA TGCCATACCA
GCCTCACAGA CAGCCTCAGT GGAAGATTGG CCCATAGAAT GGAGACAGAC TTCTACAACA
GTAGTATACG AACTTCCCGA GGATATAGAC AACAAAATCG CGCCAGACTT GCCCCTAGTC
TATTTGTTTG TTGTAGATTT GTACCAGCAC ATAGACCATT CTGGTGACGA TTCGTTCGAA
ACACTAAAAC TGACACTAGC TCTGACTATT GCAACCTTGC CCACAAATAG TCTAGTAGGT
TTGATAACAT ACGATGAGAC AGTAAAAGTG TATAATATTA GTCTGGAAAA GTATGCGGGC
TTTCCAAAGG ACACTCTATC GGTCTCCGAT GCTAAGACGT TCTCCTACAA GAAGGTGTGG
AGTCAGGAAT CTGTGGAAAA GGTGTTGAAG AAACTTCAAC TCCAATACGA TTCTCTTCCA
TATGACTATA CAAAGAGCGA AGCATATACC AAGGGAATAT TGGTAGAGGT GGGCTTGCAT
AAAACCAAGA TTCTAGAGAC CATTCATTCA TTATCCCCCA AGTACACGGA TTCATATAAA
CCATTGCGTT CCTCTGGATT GGCCCATTAT ATTAGTACTG TCATTCTAGC CAATGCTACC
CATAAGAACT GTCTTGGAAA GGTACTCCTT CTTGCTAGTG GACCTTGTAC AAACCAACCG
GGACGTATTA TTACATCGGA TTCCTCAGAA ACTATCCGTT CTCATAAAGA TATCCAAGAC
ATGAAGTCTC CCAACTTTGT ATCTTCTCTG CTATTCTACA AAACATTATC GTATATTGCT
TGTGGTCAGA CATTTGCTAA AGCTAAAGCT ATTGGAGAAA GTCCATCTAC GAAAACGACA
GATTATGATA TTCCTTCCAC AGCTCCCAGA TGGAGTGTCG ATATGTTTTC AGTATCGTTA
GACCAAGTTG GTATTTGTGA AATGAGAGCC CTCGCAGATG CAACTATGGG CAAAATTCAT
TTGTACGAAA CATTTACCTC TTCTCGTTTC AAGTCAGATC TCTTGGCTTC TGTTCGATCT
GAGGACAGCC ATTATATGAG TACTTTATCG GTTTCTACCT CCAAGGACTT GAAGCTTTCT
CAGTTGATTT TTAGTGGTGG ATACGCTTTA CCTTCTTCAT ACAGCAAAGC AGAGAAACAC
TACGAGAAGC ACCATGACAA GATTTCAGAC ACAATCACCA ATTTTGACTC GGCGAATCTG
AAGCGAAATT TTACAAACAG ATGGTCGTTC AATTGTTTGA CATGCAACGA TACTATGTCC
CTCTTCTTTG AACTGATCAC AGTTAGATCT TCGAAAGATT TGAAGCTGTT TGGAACTAGT
GATGTCTACA TACAGTTTCA GTTGAAGTTT TGGGATGCCA ATCAACAAGT TTGGAAACTT
CGTATCACAA CAATAAAGAA GCCCACTACT TTGTCGATAT TATTACGTAA CCAAATTAGA
CTATCTAATG GAGACATCAA ACTTGTGAAT TCCAAAAGTG AAGTTCTCAA AGAACATGAG
CAATTGATGA GTTTCGACCA GGAGTGTTGG ACGATTTTGC TTGCAAGACT CTTGATCAAC
AAGATTGACA CTGCATTGGG GTATGATAAG TTTGACAACT TGATCAAAAC AATTGACAAA
GTGACTGTAA AACTTTTAAA GAATTTTGGT GGAATGTCGG TGAAAGTGAA TCACAGATTG
GGAGACTCGA ACCCTTATCT GAGATTGCAA CAGATATATG AGATTAACGA AAACTTTAAA
AACTTGACAT CGTACATTTA CAACTTGAGG AAAAATCCAC TTTTGGTCAA TGTATTTAAT
TCAAGTCCTG ATGAGACATC CTTCTATCAT TCTTCATTTC TTCGACTCGG CGATGCTGCT
TCTCTAACTG CGATACAACC AAAGCTTTTT CAGTTGGCTA ACGGCAAGCT AGATGAGATT
CTTTTGGATT CCAACTGTTT GAAGTTTGCA TCTGGAACAT TTCTCATAAT GGATGCTACT
TTTTCAGTTA CGATTTATTT CATCAGCAGT GCAGAAAATA AATTGAAACT TCACCCTTCT
AATAACGACA GTCTTGTCGA TAGTAGAGAT TCAAGCATTA TAGAATCATT GGATAGTGTA
AAGCTATTAC TTGGGAATGC CCCCAGACCA ATGATTCCCA AGATCATCGT GACTCAGACC
GGTCATTCGC AGGCAAGATT TCTAATATCC AGATTAAATC CAATTGAAAA GGATCTCCAA
GCTGAATATG AAGAAGCTCA TCTTCCCAAG AAGAACAAAG GGTTCTTTGG ACTTTTTGGT
GGTTCGCAAC AAGTACAGAA ATATGACAAG ATAATGACAG ATGAACTCAG CCTCAAGCAG
TACTATGATG GCTTGATAAA ATTAATAGAC ATTTATAGAG TAGAGGATGA CTAA
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| Protein sequence | MNSKFAHLED VDGVRFNWNL FPSTRLEASR LTTPLGCLYT PLHARSCNLL PIPQLTANPL
SCDTCGNYVN PYIKLDRANG MWWCPFCEKR TSIPKDYAIP ASQTASVEDW PIEWRQTSTT
VVYELPEDID NKIAPDLPLV YLFVVDLYQH IDHSGDDSFE TLKLTLALTI ATLPTNSLVG
LITYDETVKV YNISLEKYAG FPKDTLSVSD AKTFSYKKVW SQESVEKVLK KLQLQYDSLP
YDYTKSEAYT KGILVEVGLH KTKILETIHS LSPKYTDSYK PLRSSGLAHY ISTVILANAT
HKNCLGKVLL LASGPCTNQP GRIITSDSSE TIRSHKDIQD MKSPNFVSSL LFYKTLSYIA
CGQTFAKAKA IGESPSTKTT DYDIPSTAPR WSVDMFSVSL DQVGICEMRA LADATMGKIH
LYETFTSSRF KSDLLASVRS EDSHYMSTLS VSTSKDLKLS QLIFSGGYAL PSSYSKAEKH
YEKHHDKISD TITNFDSANL KRNFTNRWSF NCLTCNDTMS LFFELITVRS SKDLKLFGTS
DVYIQFQLKF WDANQQVWKL RITTIKKPTT LSILLRNQIR LSNGDIKLVN SKSEVLKEHE
QLMSFDQECW TILLARLLIN KIDTALGYDK FDNLIKTIDK VTVKLLKNFG GMSVKVNHRL
GDSNPYLRLQ QIYEINENFK NLTSYIYNLR KNPLLVNVFN SSPDETSFYH SSFLRLGDAA
SLTAIQPKLF QLANGKLDEI LLDSNCLKFA SGTFLIMDAT FSVTIYFISS AENKLKLHPS
NNDSLVDSRD SSIIESLDSV KLLLGNAPRP MIPKIIVTQT GHSQARFLIS RLNPIEKDLQ
AEYEEAHLPK KNKGFFGLFG GSQQVQKYDK IMTDELSLKQ YYDGLIKLID IYRVEDD
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