| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52299 |
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| Symbol | VPH1 |
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| ID | 4850909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 409298 |
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| End bp | 411673 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640392617 |
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| Product | V0 domain of vacuolar H+ATPase |
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| Protein accession | XP_001387315 |
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| Protein GI | 126273870 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1269] Archaeal/vacuolar-type H+-ATPase subunit I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.303606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTG TCCAGCTATA TGTGCCTACA GAAGTGTCCC GTGACATTAT CTACAAGATT
GGGCAATTGA ACTTAATTCA GTTTAGAGAT TTGAATCTGA AAGTCAATGA GTTCCAGCGT
TCGTTTGTCA AGGAATTGAG ACGGTTAGAC AATGTAGAAC GTCAATTCAA TCGTTTCAAG
AAGGAATTGG ATCAAAGAGA CATTCCTGTC AAGACTTTTC CCTATGAATC GCTGCCCATT
GTGCCTCAGT CAGATATTGA TGAGCATGTA GAGAATGCTC AGATCTTGGA GGATCGACTT
TTACAATTGA TTGACTCGAC CAATTCGCTC TATGAAAAGC AGAAGGAATT GAAACAGTTC
AAAGCAACAA TTCAGGGTGT AGACAATTTC TTTGTAGTCA ATGCTGGGCC TCAGCTGGAG
ACCAGTGAAG AATCAGCGTT ACTTTCGCAA TTGGAATCGC AGGCGCAAGA AGCTTCACAT
GGCTCGTTTA TCAGTGGAGT TATCTCTCGT GAAAAGGTTG GAACTTTACA GCAGATCTTG
TGGAGAATTT TGAGAGGTAA CTTGTACTAT CATAGTGAAG AGTTGGCTGA GCCAGTATAC
GAGGTTCATT CCAACGAATA TGTGAACAAG AACTCTTTTA TCATCTTTTC GCATGGTGCT
ATCATTTACG ACCGTATAAA GAAGATCTGC GAGTCGTTGG ATGCGGACAT CTACGATGTG
GATGCCACTG TATCGTTGCG TTCCGACCAG TTGGCTGAAA CAAACATGAA GTTGGCTGAC
TTATCTGCGG TTCTCACTCA ATCTGAAAAC GCATTATCTT CTGAATTGAT TGCTATATCA
AGAGACTTGG CTAAATGGTG GGAAGTTATT GCTCGCGAAA AGGCCGTTTA TCAATCTATG
AATCTTTGCG ATTACGACGA CTCCCGAAAG ACGTTAGTAG CTGAGGGCTG GATTCCTACG
GATGAGATCT CGAACTTGAC GACTACAATC AAGGGTTCCG ACGATTCACA ATCGATCCCT
ACCATCATCA ACGTTCTTGA AACAACGAGA ACGCCTCCTA CTTTCCATCG AACCAACAAG
TTCACTGATG CCTTCCAGAA CATATGTGAC GCCTACGGTA TAGCCACGTA CCGTGAAGTG
AATCCTGGTT TACCTACCGT CATCACATTT CCATTTATGT TTGCTATCAT GTTTGGAGAT
TTGGGCCACG GTTTCATCTT GACATTAGTA GCTTTAGCAT TGGTGTTGAA CGAAAAGAAA
TTAGGAGCTT CCAAGCATGA CGAGATCTTT GACATGGCCT TCAGCGGTCG TTACATCTTG
TTGTTGATGG GAATCTTCTC GATGTATACC GGTTTGTTAT ACAACGATAT CTTTTCTAGA
TCTATGACGC TTTTCAGCTC CGGCTGGGAG TGGCCCGAGA AGTTTGCTAT TGGTGAAACT
GTGTTGGCCA AACAGGTTGG AACGTACATC TTTGGTTTGG ATCCAGCATG GCATGGATCT
GAGAATGCGT TGTTGTTTTC TAATTCCTAC AAGATGAAGT TGTCGATATT AATGGGTTAC
ACCCACATGT CGTACTCGTA CATCTTCTCA TTGGTGAACT ACATCCATTT CAAGAGTGTC
ATAGACATTG TTGGAAACTT CATTCCAGGC TTGTTATTCA TGCAAGGTAT ATTTGGGTAC
TTGTCGTTGT GCGTAGTATA CAAATGGACT GTAAACTGGT ATGCCATCGA TAAACAGCCC
CCAGGGTTGT TGAACATGTT GATTTCCATG TTCTTGTCAC CTGGAAATGT TGCTGAGCCA
TTGTACGAAG GTCAAGCCAG TATTCAAGTT TTTCTCTTGT TGGTAGCTTT GATTTGTGTT
CCATGGTTAT TGTTACTTAA GCCCTTGTAC TTGAAGAGAC AATTGGACAA AGCAGCTGCC
GAGTACCAGG AATTGCCTAC TGACGAAGAT GAATTGGAGG AAGGTGATGC TGCAGCTCAC
GATGACGATG AACCTCATGA AGAACACAAC TTTGGCGATA TCATGATTCA TCAGGTCATT
CACACAATCG AGTTCTGTTT GAATTGTGTA TCTCATACGG CATCTTATTT GAGATTGTGG
GCATTGTCTT TGGCCCATGC TCAATTGTCT ACTGTCTTGT GGACTATGAC CATTGGAGGC
TCTTTTGGTG CTACTGGTGC TCTAGGAGTA TTCATGACTG TCTTCTTATT TGCAATGTGG
TTCTCATTGA CGGTCTGTAT CTTGGTAGTA ATGGAAGGAA CTTCGGCCAT GTTGCACTCT
TTGAGGTTGC ACTGGGTCGA GTCTATGTCC AAGTTCTTCC AGGGTGAAGG TACATTATAC
GAGCCATTTG GCTTTAAGAA CTTGATTGAC CTCTAG
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| Protein sequence | MSLVQLYVPT EVSRDIIYKI GQLNLIQFRD LNLKVNEFQR SFVKELRRLD NVERQFNRFK
KELDQRDIPV KTFPYESLPI VPQSDIDEHV ENAQILEDRL LQLIDSTNSL YEKQKELKQF
KATIQGVDNF FVVNAGPQLE TSEESALLSQ LESQAQEASH GSFISGVISR EKVGTLQQIL
WRILRGNLYY HSEELAEPVY EVHSNEYVNK NSFIIFSHGA IIYDRIKKIC ESLDADIYDV
DATVSLRSDQ LAETNMKLAD LSAVLTQSEN ALSSELIAIS RDLAKWWEVI AREKAVYQSM
NLCDYDDSRK TLVAEGWIPT DEISNLTTTI KGSDDSQSIP TIINVLETTR TPPTFHRTNK
FTDAFQNICD AYGIATYREV NPGLPTVITF PFMFAIMFGD LGHGFILTLV ALALVLNEKK
LGASKHDEIF DMAFSGRYIL LLMGIFSMYT GLLYNDIFSR SMTLFSSGWE WPEKFAIGET
VLAKQVGTYI FGLDPAWHGS ENALLFSNSY KMKLSILMGY THMSYSYIFS LVNYIHFKSV
IDIVGNFIPG LLFMQGIFGY LSLCVVYKWT VNWYAIDKQP PGLLNMLISM FLSPGNVAEP
LYEGQASIQV FLLLVALICV PWLLLLKPLY LKRQLDKAAA EYQELPTDED ELEEGDAAAH
DDDEPHEEHN FGDIMIHQVI HTIEFCLNCV SHTASYLRLW ALSLAHAQLS TVLWTMTIGG
SFGATGALGV FMTVFLFAMW FSLTVCILVV MEGTSAMLHS LRLHWVESMS KFFQGEGTLY
EPFGFKNLID L
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