| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52223 |
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| Symbol | TYR1 |
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| ID | 4851414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1759252 |
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| End bp | 1760601 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | |
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| GC content | 43% |
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| IMG OID | 640393122 |
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| Product | prephenate dehydrogenase |
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| Protein accession | XP_001387975 |
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| Protein GI | 126274542 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.135513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCCG TGTCGAAGTA CACAGCGGCT GAAACAGAGG CTCTCCAAAA ATCCAAGACC
ATCGGGATCA TTGGGTTGGG AGACATGGGC TATCTCTATG CTAAAAGATT CTCTGAAGCT
GGGTGGAATG TCGTGGGTTG CGATCGTGAA GATCTCTATG AAGAAACAGT ACAAAAGTTT
GCTGATGACA AATTCAAAAT TCTTCGTAAT GGACATTTCG TTTCACGTAT CTCGGATTAT
ATCATCTATT CTGTAGAAGC CGAGAACATC CGGAAAATTA TTTCGATCTA CGGGCCGTCC
ACTAAGTTCG GAGCCATTGT GGGGGGACAG ACCTCATGTA AAGAGCCTGA AATTGCTGCA
TTTGAAGACA TTTTGCCGAA AGATGTGAAA ATCATCTCAG TCCACTCATT ACATGGTCCT
AAAGTTTCTA CTACTGGGCA GCCTTTGGTA CTTATAAATC ATCGTGGAGA TGACGAAAGC
TTTAGATTCG TAGAATGTTT GGTTTCATGT TTGAACTCAA AAATCGTATA TCTTTCAGCC
AAAGAACACG ACAAAATTAC AGCAGATACT CAAGCTGTGA CTCATGCTGC ATTCTTATCG
ATGGGTGTAG CTTGGATGAA CATCAACCAA TATCCGTGGG TTACACCTCG ATGGATCGGA
GGGTTGGAGA ATGCCAAAAT GAACATATCT TTGCGGATAT TCTCTAACAA ATGGCACGTC
TATGCTGGTT TAGCCATCAC AAACCCTTCT GCTCATGAAC AAGTGTTGCA GTACTCGAGT
TCCACGACAT CTTTGTTCAC TCTTATGATC CAGAAAAAAA AGGACGAGCT CAGAGAAAGA
ATGCTCAAGG CCAAGGAATT TGTGTTTGGC CACATCAACG ACCACGATCT ACTCTTGGAC
GACTACATTT TGCAGAAATT CTCGTTGAGT AAAAATCCAC CTGGTGGGAA GCAGCCCAAT
TCACATCTTT CGTTGCTAGC CATTGTAGAC TCGTGGTTCA CTTTGGGAAT AGTGCCTTAC
GACCATATAA TCTGCTCCAC ACCTTTGTTT AGAATCTTCT TGGGAGTCAC AGAGTACTTA
TTTTGCGCCC CTGGATTGCT AGAGGAATGT ATAGAAGATG CTGTTCATGA CGAATCCTTC
AGACAAGACG ACTTGGAATT CACTATCGCC GCCAGAAACT GGGCCAGTAT TATCTCCTTT
GGAAACTTCG AGTTGTACAA GCGAGAGTTT GAAAAGACGC AGAAATTTTT CCTGTCCAAG
TTTTCTGAGG CTAATGTTAT AGGTAACGAA ATGATCAAAA CCATTCTTGA AAGAGTCCAC
GAACGTGAAG CAGCAAACGA GTCTAAATAA
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| Protein sequence | MTAVSKYTAA ETEALQKSKT IGIIGLGDMG YLYAKRFSEA GWNVVGCDRE DLYEETVQKF
ADDKFKILRN GHFVSRISDY IIYSVEAENI RKIISIYGPS TKFGAIVGGQ TSCKEPEIAA
FEDILPKDVK IISVHSLHGP KVSTTGQPLV LINHRGDDES FRFVECLVSC LNSKIVYLSA
KEHDKITADT QAVTHAAFLS MGVAWMNINQ YPWVTPRWIG GLENAKMNIS LRIFSNKWHV
YAGLAITNPS AHEQVLQYSS STTSLFTLMI QKKKDELRER MLKAKEFVFG HINDHDLLLD
DYILQKFSLS KNPPGGKQPN SHLSLLAIVD SWFTLGIVPY DHIICSTPLF RIFLGVTEYL
FCAPGLLEEC IEDAVHDESF RQDDLEFTIA ARNWASIISF GNFELYKREF EKTQKFFLSK
FSEANVIGNE MIKTILERVH EREAANESK
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