Gene PICST_51697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_51697 
Symbol 
ID4851471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp1909920 
End bp1910321 
Gene Length402 bp 
Protein Length133 aa 
Translation table 
GC content48% 
IMG OID640393179 
Productpredicted protein 
Protein accessionXP_001387603 
Protein GI126274599 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA CAGACGAAGA ATGGAGAGCT ATTCTCTCTC CAGCCCAATT CAAGGTGTTG 
AGAAGAAGCG CAACCGAGGC TCCCTACACT GGAGAATACA CTTCGACACC AGCTTCTGAA
ACTGGATATT ACGAATGTGC GGGATGTCAG CAGCCATTAT ACAAGGCTCT GACCAAGTTC
ATAGCCCACT GTGGTTGGCC TGCTTTCTAC GAAGCCATTC CAGGCTCTAT CACTGTTCAC
AGAGATACTA CTGCTGGCAT GGTGAGAGAA GAGATGAGAT GCTCCAATTG CGATGGCCAT
TTGGGGCACA TTTTTAGGGG AGAAGGCTAC AAGACACCTA CGGACGAGAG ACACTGCGTA
AACAGTATCA GTTTGAAGTT AAATACTGGC GAGAGCAAGT AG
 
Protein sequence
MSKTDEEWRA ILSPAQFKVL RRSATEAPYT GEYTSTPASE TGYYECAGCQ QPLYKALTKF 
IAHCGWPAFY EAIPGSITVH RDTTAGMVRE EMRCSNCDGH LGHIFRGEGY KTPTDERHCV
NSISLKLNTG ESK