| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51473 |
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| Symbol | |
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| ID | 4851521 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2048001 |
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| End bp | 2052572 |
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| Gene Length | 4572 bp |
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| Protein Length | 1448 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393229 |
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| Product | predicted protein |
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| Protein accession | XP_001388018 |
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| Protein GI | 126274739 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
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| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.391581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAG AAACGTCCAA ATCGCCCACT CCAGGCTCCG GATGGAACCT AGCCAAACTC
TCCAAGGACG ATTTGACCAG AAGAGACCTC TTTGGCCGAA CCATTCTCCA TTTGCTTATT
CTTCTGAGCC GTCATGACTT GATCCGCAAT CTCATCAAGA ACCCCGACAT CAAACTGGTG
ATCCTGTTGA CTGACTACGA GAACGGCTGG AACTGTCTTC ATTATGCCAT CTTCCACAAA
CGGCTCACTT GCTTCAAGAT GTTGATAGAA TACTTCAAAA ACTCCAGTGC AAAGCTGAAT
ATGCTCATAG CCAACAACAC CGTTCTCTAT GACTTGCTCC GATGCAAAGA TCGAAACGGA
GCAACACCTA TCCAGTTGCT TGATAATGAT TTCAAGGACT TGGTCTGGAT TCCACTGTAT
ATCAATGAGA AAAATGAGTA CCACTTGACC CAGGCAAATT CTCAAGAAAA TGCAAATGAA
GCTAACGAAA TAGAATCTTC CAATGCAGAA CCTACCAATG GTAATAATGT TACAAATAAT
AGCAATACTA CCAATACCAA CACGACTAAT AATACAAATA CGACCAATAC CACCAATAAC
GCCAATGCTG CTAATGCTAA CGTGAATGAT ATCACCAATA ATTCCATTCA TGTCAGAAGA
GCTTTTGTAC GATCAGATCC TTACGAATGG ACTCATAGCA GAGGTGGATC AGAGATCTAC
ATGTTTGGTT CCAACAACAA CAATCAGCTT GGAGTAGGGG ATTCGACCAA TCGATCTGTA
CCTTCTAGAT TGGCACATTC TGCTTTCAAA TCGAAAAAAG AAGAGATCAC AGCTCAAGAC
ACATATCGTA AACCAAGATA TAAGCAAGTA GCACTATCTA AGAATCACTC ACTTATCGTC
ACCAGAGATG GAGAACTCTT CTCTTGCGGT ATAGGTTCGC GTGGCAGATT GGGACACGGC
TTTGAAGACT TGAACAACTA CTATAGGTTC AAAAAAGTAG AATTCTTCAG CGATGAATAT
GAAACAAAGC ATGTAAAAGA AGTGGCCATC TCAAACAATC ACTCTCTAGT GCTTACTTCC
GATAATGAAG TATACTCTTG GGGACTCAAT AGTTTCAAAC AACTTGGATA TGAATCGAAT
AACAATGCCA ACTACAACCA GAAGAAAGGC TTTCTTGAAA CATTTGAAGC GAACCCAACT
CTTGTCTTAG GAGACTTACG CAAGTACTCG AAGCCGATAA TCGGTATTTC AGTCTCAAAG
GTCCATTCCG TCGCATATTC CAAAAATGAG CTCTTTTTTT GGGGCCTTAA CGTGGGCCAA
ATGGGGATAC CCGCTTCAGA CAGCAATATT GAAGTCAAAC TCCATGATAC AGTTTTCAAG
GGAGAGATCC AGGGTACACC CAAGATGGTT CTGTTGAAGG ATGACATCAA ATGTCTAGAC
ACTACGGAAT TGTGCACTTG GTTGGTTACT GATAAAAATG ACATTCATGT CTACTACAAT
TACCAACACT TCAAGTTGCC AAAAGTCCCA GTCAAGGCTT CAAGCGATAA ACATTTTGAC
TTGTTCAAAC CGACCATACT CACCCAGGTT GTGAAAATCA AAAAGATTGT AAGCATGAAT
CACGAATTCT GTTCTCTACT TCTTGAAAAT GGCAGCGTCA TGACTTGCAC ACCCAACATC
AGAGATATTA AGAATACCAA GTTCACTTCG GTATGGAAAG CTTATGACCA CGATATGGTG
GTAACAGATA TCGATGTTTC AAATGATGGT TCCATCGTGT TGTGTACCAG AAATGGATCT
GTTTTCATCA AATCGAGTCA TTCCAACCAA AGAAAGAATT CGATGTCGGA AGCTTCTCTT
CCTATTCCTG TAACAAAGAA TAAGTTTAAG AAGATCGACA ATCTCAACAA AGTAGTTCGA
GTTTGCTGTG ATTTCAACTT TCTTTCTTTT GGTTTTGTGC GAGACGACGT AGATGTATTT
CCGTTAAAAT TGCAGAAGAA CGACTTCTTC AAGGATATCA ACTATCTCAG TTGTTTACAC
GAGAGCGATT TTTCAAGAAA ACAGGAACAG TTGTTGAAGG TCGACCATAA GTTCCATACA
TACATTTCCA ACTTCATCTA TCCTGATTCC TCTGTTGAAG ACGTCGATAA TGATGGAGAG
TGCTCAAAAA GCTGCTCAAG GTATCATGCT AAATTTGACT CCAGCAAGAA TAAAAGACCA
AAAGTGGAGG AAACTCTTGA TCTTATATCT GATTCTGATG ACCAGCAGCT TGCTAATTCG
GTAATCCTTG AAGGCGGTGT TCTCTGTGGC GACTTCAGTG ACGAAGCCTT TCTGGAAAGT
AACAAGGGTT ATGATTGTAA AATCACATTT GCGCAGTATA AAGGTATCAG TTTGGGTATT
CACAAGAAAA TCTTTGAAGT CAGATCAAAA GTATTTGAAA GGATTTTCAA CCCCAAGGAA
GTCGATGAGT TATTCGAGCA CGGAAACTTT GTATCCAAGT ACAATTCAGG AAATAGTGTA
CTCCATATTG AATCAAAAAT CGAGATTGAA TCGGTCTTGT TGTTAATTCA TCTGATATAC
ACCAGCAAAA CTTTGGACCT CTGGAAGAAC TACCTGTCCA TGCACAGTTA TCCCTCACAT
TTAAAGAAGA TATTTAGTGA GTATACTATG CTATTGGACA TTTTTAAAGT ATCCAATTCC
TTTAAGGCTG CTCATGGATG TAGCGAATTG TTGAAAACTT TCCAGAAGAT GATCGACAAC
TCTGGAGACG TTATCATCAG GCTTAATGAC GGAGAAATGA GATGTCATTC GTACATTTTG
AGGACTAGAT CAGCCTTTTT TGAAACAGTT TTATCTCCTC GTTGGGATAC TATGGAGAAT
AAAGAACTTG ACTTCAGTGG ACTCTCTCGA GCCCAGTTTT CAGTCATATT GAAACATCTC
TATGGGTACA ATGACTATGC GGTTTTTGAT AGCATGAAGC TTTCTTTTTC CGAGTCAGAC
GAGTTTGTAA ACGAGTTATT GGAGATGATC GAGATCGCAG ACGAGTTGCT CTTATTCCAA
TTAAAGGCTC TTTGCCAAGT TGTCATCTCT GATTTCATTT CTCTCGACAA CGTTATCCTC
TTGTTAGTAC ATGCTGACTA CTTATCGGCT CCAAAGTTGT TCAAAAACTG TTGCTGGTAC
ATCCATAACA ATCTTGAAAT ACTTTTGTTT GACACTTCGT TTAAAGACTT GCCATTGGAG
ATTATCGAGA AACTCGAGAG CCAAATCAAG TACTTTGAAA ACTGCAAGAT TCTTGACTTT
GCCAACGAGA AGGGAGAGTT GAACTACGAG ATGTTAAGTA ATGTCTTTGA GAAGAGATCA
AGCTATCTTA TCAACTTGTA CATGAACAAC ATGCCTTTGT TCAACGAATT CTTCATCAGT
GACCGTAAAG GATTCATGGC TTTTGAGCCA TTGATAGATG TCAAATATGA AAATAAGAAG
ATTGCTAAAG ACGCTGCTGC GAAAAGGAGA AAGTCACGAA AGAGCTCAAA CGTTGTCAGC
AGTGAAATTA ACGACTTCAG AACCAACATA TCTCCTAAAG AAAAGGAAAA TTTGGAAAAA
TGGCAGGCTA TCGATGATAG TCATGATTCT TCAGGTGAGT TTGAGTTGGT GATCAACCGT
TCGAGGCAAA AGAAAGTTGA TTTCAGTAGT CCCTCGCCGA CTCCACCCAA CTCGAATCCT
ACTTCTAGAA CTTCGTCAGT TAGTAATGTC AGTCAAATTA TTCCTAAGGC TGCAATTACT
ACGACTAAAC CAGTTGCTAT TCCAGTACCT TCTAAAACTG TGATGACTGG ATTGAGTCCT
TATTCCAATT GGGCATCAAA GTCTTCTGGC TCTTCTATTC TTAGCGATAG ATTCCAACAG
CCTAGTTTAG GTAAATCCGT AGAATCTGGA AGTTCTCCAG AATGGCCAAA AAAAACTAGC
AAAGTCAAAA TCGGTCCGGT AATGAAGTTG TCTCAAAAGG AAAGAAAGAA GATGGCGGCT
GCGGCTGCAG CAGCTGAACT TAAGGAAGTG AATGTACCCA AGAAAGAAAC TAGTTCACCT
GTGAATCCAT GGGGCTTATT GCCTACAACC CCAATTGTAC CTACTTCTAC TGCTGAATCT
GTTAAGGTGC TTCCAATATT AGGAAGTAGC AACTCTTCAA ATCAAGACAA GGCAAGTTCG
AAAAAGAAGT CAAACAAAAC TACCACTGAA ACATCTACCG CAACCCTGAA CGTAAAGTTA
GTTCCTCCAA CTCGTACTGG CCCTCTGTCA GGCAGTAGTT CCTTACCGTT GGCTAGTGCT
CTTTCCTCTT CTTGCACTCT AAATTCCAGT ACATCGTATA ATAGCGTGTA CTCGACTCCA
TCGCTTACAG AGGTAATGAT CGAAGAATCT CTAAGAGTCG AACGGGAAAA GTTGCAGGAG
TCAGAACGCA AAACCTTGGC CGAGGTTCAG AAGGAGCAGG AATTCGCGAA ATGGTGGGAA
GAAGAGTCTT TAAGAGTTCA GAAACAGATG TCTATGGACA GCGGTAGTAG TAATAACAAA
TCCAAGCCCA AA
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| Protein sequence | MNRETSKSPT PGSGWNLAKL SKDDLTRRDL FGRTILHLLI LLSRHDLIRN LIKNPDIKLV
ILLTDYENGW NCLHYAIFHK RLTCFKMLIE YFKNSSAKLN MLIANNTVLY DLLRCKDRNG
ATPIQLLDND FKDLVWIPLY INEKNEYHLT QANSQENANE ANEIESSNAE PTNAFVRSDP
YEWTHSRGGS EIYMFGSNNN NQLGVGDSTN RSVPSRLAHS AFKSKKEEIT AQDTYRKPRY
KQVALSKNHS LIVTRDGELF SCGIGSRGRL GHGFEDLNNY YRFKKVEFFS DEYETKHVKE
VAISNNHSLV LTSDNEVYSW GLNSFKQLGY ESNNNANYNQ KKGFLETFEA NPTLVLGDLR
KYSKPIIGIS VSKVHSVAYS KNELFFWGLN VGQMGIPASD SNIEVKLHDT VFKGEIQGTP
KMVLLKDDIK CLDTTELCTW LVTDKNDIHV YYNYQHFKLP KVPVKASSDK HFDLFKPTIL
TQVVKIKKIV SMNHEFCSLL LENGSVMTCT PNIRDIKNTK FTSVWKAYDH DMVVTDIDVS
NDGSIVLCTR NGSVFIKSSH SNQRKNSMSE ASLPIPVTKN KFKKIDNLNK VVRVCCDFNF
LSFGFVRDDV DVFPLKLQKN DFFKDINYLS CLHESDFSRK QEQLLKVDHK FHTYISNFIY
PDSSVEDVDN DGECSKSCSR YHAKFDSSKN KRPKVEETLD LISDSDDQQL ANSVILEGGV
LCGDFSDEAF LESNKGYDCK ITFAQYKGIS LGIHKKIFEV RSKVFERIFN PKEVDELFEH
GNFVSKYNSG NSVLHIESKI EIESVLLLIH LIYTSKTLDL WKNYLSMHSY PSHLKKIFSE
YTMLLDIFKV SNSFKAAHGC SELLKTFQKM IDNSGDVIIR LNDGEMRCHS YILRTRSAFF
ETVLSPRWDT MENKELDFSG LSRAQFSVIL KHLYGYNDYA VFDSMKLSFS ESDEFVNELL
EMIEIADELL LFQLKALCQV VISDFISLDN VILLLVHADY LSAPKLFKNC CWYIHNNLEI
LLFDTSFKDL PLEIIEKLES QIKYFENCKI LDFANEKGDY LINLYMNNMP LFNEFFISDR
KGFMAFEPLI DVKYENKKIA KDAAAKRRKS RKSSNVVSSE INDFRTNISP KEKENLEKWQ
AIDDSHDSSG EFELVINRSR QKKVDFSSPS PTPPNSNPTS RTSSVSNVSQ IIPKAAITTT
KPVAIPVPSK TVMTGLSPYS NWASKSSGSS ILSDRFQQPS LGKSVESGSS PEWPKKTSKV
KIGPVMKLSQ KERKKMAAAA AAAELKEVNV PKKETSSPVN PWGLLPTTPI VPTSTAESVK
VLPILGSSNS SNQDKASSKK KSNKTTTETS TATLNVNSLP LASALSSSCT LNSSTSYNSV
YSTPSLTEVM IEESLRVERE KLQESERKTL AEVQKEQEFA KWWEEESLRV QKQMSMDSGS
SNNKSKPK
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