Gene PICST_51318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_51318 
SymbolMAK11 
ID4850926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp463784 
End bp465043 
Gene Length1260 bp 
Protein Length419 aa 
Translation table 
GC content40% 
IMG OID640392634 
Productessential for cell growth and replication of M dsRNA virus contains four beta-transducin repeats 
Protein accessionXP_001387726 
Protein GI126273887 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCTCGAAATG TAAGCTCTAG TACCAAAAAG ATTCAGTTTC GTATTATGGT TGGATCGTAT 
GAACACAATT TGTTATGTGT TTCTGTCATT TTGGATGCTG CTGCAGAAAA AGAAGCTGTT
TTTCAACCAA TTTTCCATTT TCAAGCACAT GCCCTTTCCA TCAAATCCAT GGATATTGCC
AAGCGATACC TTGTTACCGG ATCCAATGAT GAGCATATAA GAATATACGA TCTTCAGAAG
AGAAAAGAAT TGGGTCATTT GTTGAGTCAT GAAGGTACGA TTACCACTCT TAAATTTTCT
AAAGAAGTCT CAGTAGACCA TCCTGAATTC GCAGAGAAAT CTGGCAAGTG GCTTTTGTCT
GGATCTGAAG ATGGCAAGAT CATCATATGG AGAACCAAAG ACTGGGAAAC GTTTGGAACC
TTGAAGGGAC ATACCGGTAA AGTAAATGAC TTGGCTATAC ACCCCAGTGG CAGAGTAGCA
ATTTCCGTCT CACAGGATAA GACTATCAGG TTGTGGAACT TGATGACGGC TAAGAAAGCA
GCAGTTCTCA AGATCAAGGG TAAGGATCAT TTGGGCCAGA GTGGAGATTT TGTAAGATGG
TCTGTAGACG GAAAATATTT CCTTGTCGGG TTATTGAACC AGATCTTGGT TTACAATACT
TCCTCAGCTA AAATTGTTAA GAAAATCTCG TTCAAGTCGA CGTTGATGAC ATTAGACATA
GTAAGAATAG AAGGAAAGGA ATGGCTTGTC ACAGGTCACG GTGATGGTAC CATTGATTTC
TTTGACTTCG AGCAACAAGT ATTAGCATCT ATTGTAGAAA ATGAAGAAGA GTCAAAAGTG
TGGGACTCCA AGGCCGAGAA GTTGACTGCT GATTTCATAT TAAGGGGCCA TACTAACCGT
ATCAAAGGCT TTACTTTCTA TAGCCATCCT CAGGAAACTG GAGGAATTCC TCTTCTCATT
TCTGTTTCAT CCGATGGAAA GATTGTAATC TGGAATCTTT CTGAAAATGT TAGAGACCAA
GTTGCTGTCT ACGACACCGG TGAAAGATTA AACTGTGTAG CAGCATGTTC TGAAAATGTG
GAAAAGGTGG ATTCCATGAA GAGACGTTTC AATAGCATGG GCGAACTCAA GGGCGAAGAG
GTAGACGGTG CCATCAGCGA ATCAGAGTAC GAAACTGATG GAGAAGAAAT CAAAAAGATC
ATGTTGAAGG GCAAGAAAAA GGGCAACAAG AAGAGAAAGG TTAAAGTTAC GTTGGAATAA
 
Protein sequence
SRNVSSSTKK IQFRIMVGSY EHNLLCVSVI LDAAAEKEAV FQPIFHFQAH ALSIKSMDIA 
KRYLVTGSND EHIRIYDLQK RKELGHLLSH EGTITTLKFS KEVSVDHPEF AEKSGKWLLS
GSEDGKIIIW RTKDWETFGT LKGHTGKVND LAIHPSGRVA ISVSQDKTIR LWNLMTAKKA
AVLKIKGKDH LGQSGDFVRW SVDGKYFLVG LLNQILVYNT SSAKIVKKIS FKSTLMTLDI
VRIEGKEWLV TGHGDGTIDF FDFEQQVLAS IVENEEESKV WDSKAEKLTA DFILRGHTNR
IKGFTFYSHP QETGGIPLLI SVSSDGKIVI WNLSENVRDQ VAVYDTGERL NCVAACSENV
EKVDSMKRRF NSMGELKGEE VDGAISESEY ETDGEEIKKI MLKGKKKGNK KRKVKVTLE