Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_51227 |
Symbol | BGL6 |
ID | 4850995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 659296 |
End bp | 661827 |
Gene Length | 2532 bp |
Protein Length | 843 aa |
Translation table | |
GC content | 44% |
IMG OID | 640392703 |
Product | beta-glucosidase |
Protein accession | XP_001387766 |
Protein GI | 126273956 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGCAC AAGAACTAGA TATTGAGTAT TTAATCAAGG AGTTGACACT TCCTGAAAAG ATCTCCTTGT TGGCTGGTAA GGATTTCTGG CACACTTTTC CAATAGAGAG ATTGAACATT CCTTCAATCA GAGTTTCGGA CGGTCCTAAC GGTATCAGAG GTACCAAGTT CTTCAACTCG GTTCCTTCTA ACTGTTTTCC ATGTGGTACC GGTTTGGCTG CTACCTTCAA CAAGGACTTG TGGGTTGAGG CTGGTGAGTT GATGGGTAAG GAAGCCAAGA TGAAGGGTGC CCATGTGATC TTAGGTCCTA CCTCGAACAT CGTTCGTTCT CCATTGGGAG GAAGAGCCTT CGAATCGTAC TCCGAGGACC CTCTTTTGTC TGGACATGCT GCCTCAAACA TCATCAAGGG CATTCAAAAC GAAAATGTCG TTGCATGTCT TAAGCACTTT GTCTGTAATG ATCAAGAAGA TGACAGAAGA GGTGTCGACA CCTTGTTGAC CGACAGAGCT TTGAGAGAAA TCTACTTGAA GCCATTCCAA ATAGCGTTGA GAGATTCTGA ACCTGGTGCT TTGATGACTT CTTATAACAA GATCAGAGGT ATTCATGTTT CGGAATCTAA AGAACTCATG CAAGATATTT TGAGAGACGA GTATAAGTAC GAAGGTACTA CAATGTCTGA CTGGTTAGGT ACTAACTCAA CTAAGGCCGC CTTGGATGCT GGAGTCAACT TGGAAATGCC TGGCCCAGCC AGGTTCAGGA CTCAACTCCA GGTCACCCAC GAAATTCAGT CTAAAAGAAT CCACGCCCAG ACTATTGACG ACAATGTTCG TGGTGTCTTG AAGTTGATCA ATAGGGCATT GAAGGCAGGA ATTCCAGACG ATGTTGTAGA GTCTGCCAAC GAAGATCCTG CTTCCTCAGA ACTCTTGAGA AAGGTGGGTG ACGAGTCTAT TGTTTTGTTG AAGAACGAAG GCAACATCTT GCCTTTGTCC AAGACTTCTG TTGCTGGTCA AGAAAAGATC GCTGTCATTG GTCCTAATGT CAAGGCTGCT CAAGACTCTG GTGGTGGATC TGCTTCTCTT ACTGCTCGTT ACAAGGTTAC CCCATGGGAG GGTATCAAGA AGAAGATCGA GGAAGGTGGA AACACTGTTT CGTTGGAATA CTCCTTAGGT GCTTTCTTAG ATAAGAACAT GCCTGATGTT GGTGACATCT TAGAAAACGA CAAAGGTGAA AAGGGTGTCA CTGCCAAGTT CTACAAAACT GCTCCGGGAA CCAAGGACAG ACAACAGTTT GCTGAACGTT TTCTTCCAAC AACTAAGCTC TGTCTTTTCG ACTTTAAAGA CCCTGAATTG GCACCAGGCG AAGTGTTGTT CTACGCTGAT TTTGAAGGTT ACTTTACTCC TGAGGAAACT GCTGATTATG AATTTGGTGC TTCAGTTATG GGTACTGCTC AAGTCTTTGT TGACGGTAAA TTAGTTGTCG ACAACAAGAC CAAGCAAACG AAAGGGGATG CCTTCTTCTT AGCTATGGGA ACAAGAGAAG AAAGAGGTAC TGTCCATTTG GAAAAGGGCA AAAAATACCA TGTTAAGTGT GAGTTTGGTA CTGCTCCAAC ATATACCTTG GATCCGACTC AAGAAATTGG AGGTGCCTTT TTCGGTTTCA GAATTGACTC TCCACAAGAA ACTGAACTCA CCAAGGCCAT TGAACTTGCC AAGTCTGTTG ACAAGGTCAT CTTGGTTGTT GGCCTCTCCA AAGAATGGGA ATCTGAGGGT TTCGACAGAT CAGACATGGA CATTCCAGGT GCCACTAACC AGTTGATTGA AGAAGTCTTG AAGGTCAACA AGAATGTCGT CATCGTTAAC CAATCTGGTT CTCCAGTAAC TATGCCATGG GCTGAAAAAG TTCCAGCTTT GGTCCACGCT TGGTACGGTG GTAACGAATT GGGTAACACC ATTGCTGATG TATTGTTTGG TGATGTCAAC CCATCTGGTA AGTTGTCTAT GTCATTCCCA AAGAAACTTG AAGACACTCC TTCGTACCTC AACTATGGTT CCATCAACGG TCAGGTCTGG TATGGTGAAG ACATCTTTGT GGGATACAGA TACTACGAGA AGGTTAAGCA GGATGTTTTG TTCCCATTCG GTTTCGGTTT ATCCTACACC ACTTTCGACT TCAAGGACTT GTCTGTTGCA GCCGATGACG AAAACGTTAC TGTTAGCGTC AAGGTCACCA ACACCGGTTC TGTAGATGGT TCTGAGACAG TTCAAGTCTA CATTGAACAA TCTAACCCAA GTGTCATCAG ACCTGTCAAA GAATTGAAAG AATTCGGTAA GGTCTTCTTG AAGGCTGGTG AAACGAAGTC TGTCGAAGTC AAGATCTCCA TCAAAGAGGC TACTTCTTAC TGGAATGGTT ACTTTAGCAA ATGGGAATCC ACAAAAGATA CTTACAAGGT ATTGGTAGGT AACAGTTCAG ACAACATTAT TGTTGAAGGT GAATTTGCTA CCTCCAAGAC TTTCTACTGG TTGGGGTTGT AG
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Protein sequence | MGAQELDIEY LIKELTLPEK ISLLAGKDFW HTFPIERLNI PSIRVSDGPN GIRGTKFFNS VPSNCFPCGT GLAATFNKDL WVEAGELMGK EAKMKGAHVI LGPTSNIVRS PLGGRAFESY SEDPLLSGHA ASNIIKGIQN ENVVACLKHF VCNDQEDDRR GVDTLLTDRA LREIYLKPFQ IALRDSEPGA LMTSYNKIRG IHVSESKELM QDILRDEYKY EGTTMSDWLG TNSTKAALDA GVNLEMPGPA RFRTQLQVTH EIQSKRIHAQ TIDDNVRGVL KLINRALKAG IPDDVVESAN EDPASSELLR KVGDESIVLL KNEGNILPLS KTSVAGQEKI AVIGPNVKAA QDSGGGSASL TARYKVTPWE GIKKKIEEGG NTVSLEYSLG AFLDKNMPDV GDILENDKGE KGVTAKFYKT APGTKDRQQF AERFLPTTKL CLFDFKDPEL APGEVLFYAD FEGYFTPEET ADYEFGASVM GTAQVFVDGK LVVDNKTKQT KGDAFFLAMG TREERGTVHL EKGKKYHVKC EFGTAPTYTL DPTQEIGGAF FGFRIDSPQE TELTKAIELA KSVDKVILVV GLSKEWESEG FDRSDMDIPG ATNQLIEEVL KVNKNVVIVN QSGSPVTMPW AEKVPALVHA WYGGNELGNT IADVLFGDVN PSGKLSMSFP KKLEDTPSYL NYGSINGQVW YGEDIFVGYR YYEKVKQDVL FPFGFGLSYT TFDFKDLSVA ADDENVTVSV KVTNTGSVDG SETVQVYIEQ SNPSVIRPVK ELKEFGKVFL KAGETKSVEV KISIKEATSY WNGYFSKWES TKDTYKVLVG NSSDNIIVEG EFATSKTFYW LGL
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