Gene PICST_51227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_51227 
SymbolBGL6 
ID4850995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp659296 
End bp661827 
Gene Length2532 bp 
Protein Length843 aa 
Translation table 
GC content44% 
IMG OID640392703 
Productbeta-glucosidase 
Protein accessionXP_001387766 
Protein GI126273956 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGCAC AAGAACTAGA TATTGAGTAT TTAATCAAGG AGTTGACACT TCCTGAAAAG 
ATCTCCTTGT TGGCTGGTAA GGATTTCTGG CACACTTTTC CAATAGAGAG ATTGAACATT
CCTTCAATCA GAGTTTCGGA CGGTCCTAAC GGTATCAGAG GTACCAAGTT CTTCAACTCG
GTTCCTTCTA ACTGTTTTCC ATGTGGTACC GGTTTGGCTG CTACCTTCAA CAAGGACTTG
TGGGTTGAGG CTGGTGAGTT GATGGGTAAG GAAGCCAAGA TGAAGGGTGC CCATGTGATC
TTAGGTCCTA CCTCGAACAT CGTTCGTTCT CCATTGGGAG GAAGAGCCTT CGAATCGTAC
TCCGAGGACC CTCTTTTGTC TGGACATGCT GCCTCAAACA TCATCAAGGG CATTCAAAAC
GAAAATGTCG TTGCATGTCT TAAGCACTTT GTCTGTAATG ATCAAGAAGA TGACAGAAGA
GGTGTCGACA CCTTGTTGAC CGACAGAGCT TTGAGAGAAA TCTACTTGAA GCCATTCCAA
ATAGCGTTGA GAGATTCTGA ACCTGGTGCT TTGATGACTT CTTATAACAA GATCAGAGGT
ATTCATGTTT CGGAATCTAA AGAACTCATG CAAGATATTT TGAGAGACGA GTATAAGTAC
GAAGGTACTA CAATGTCTGA CTGGTTAGGT ACTAACTCAA CTAAGGCCGC CTTGGATGCT
GGAGTCAACT TGGAAATGCC TGGCCCAGCC AGGTTCAGGA CTCAACTCCA GGTCACCCAC
GAAATTCAGT CTAAAAGAAT CCACGCCCAG ACTATTGACG ACAATGTTCG TGGTGTCTTG
AAGTTGATCA ATAGGGCATT GAAGGCAGGA ATTCCAGACG ATGTTGTAGA GTCTGCCAAC
GAAGATCCTG CTTCCTCAGA ACTCTTGAGA AAGGTGGGTG ACGAGTCTAT TGTTTTGTTG
AAGAACGAAG GCAACATCTT GCCTTTGTCC AAGACTTCTG TTGCTGGTCA AGAAAAGATC
GCTGTCATTG GTCCTAATGT CAAGGCTGCT CAAGACTCTG GTGGTGGATC TGCTTCTCTT
ACTGCTCGTT ACAAGGTTAC CCCATGGGAG GGTATCAAGA AGAAGATCGA GGAAGGTGGA
AACACTGTTT CGTTGGAATA CTCCTTAGGT GCTTTCTTAG ATAAGAACAT GCCTGATGTT
GGTGACATCT TAGAAAACGA CAAAGGTGAA AAGGGTGTCA CTGCCAAGTT CTACAAAACT
GCTCCGGGAA CCAAGGACAG ACAACAGTTT GCTGAACGTT TTCTTCCAAC AACTAAGCTC
TGTCTTTTCG ACTTTAAAGA CCCTGAATTG GCACCAGGCG AAGTGTTGTT CTACGCTGAT
TTTGAAGGTT ACTTTACTCC TGAGGAAACT GCTGATTATG AATTTGGTGC TTCAGTTATG
GGTACTGCTC AAGTCTTTGT TGACGGTAAA TTAGTTGTCG ACAACAAGAC CAAGCAAACG
AAAGGGGATG CCTTCTTCTT AGCTATGGGA ACAAGAGAAG AAAGAGGTAC TGTCCATTTG
GAAAAGGGCA AAAAATACCA TGTTAAGTGT GAGTTTGGTA CTGCTCCAAC ATATACCTTG
GATCCGACTC AAGAAATTGG AGGTGCCTTT TTCGGTTTCA GAATTGACTC TCCACAAGAA
ACTGAACTCA CCAAGGCCAT TGAACTTGCC AAGTCTGTTG ACAAGGTCAT CTTGGTTGTT
GGCCTCTCCA AAGAATGGGA ATCTGAGGGT TTCGACAGAT CAGACATGGA CATTCCAGGT
GCCACTAACC AGTTGATTGA AGAAGTCTTG AAGGTCAACA AGAATGTCGT CATCGTTAAC
CAATCTGGTT CTCCAGTAAC TATGCCATGG GCTGAAAAAG TTCCAGCTTT GGTCCACGCT
TGGTACGGTG GTAACGAATT GGGTAACACC ATTGCTGATG TATTGTTTGG TGATGTCAAC
CCATCTGGTA AGTTGTCTAT GTCATTCCCA AAGAAACTTG AAGACACTCC TTCGTACCTC
AACTATGGTT CCATCAACGG TCAGGTCTGG TATGGTGAAG ACATCTTTGT GGGATACAGA
TACTACGAGA AGGTTAAGCA GGATGTTTTG TTCCCATTCG GTTTCGGTTT ATCCTACACC
ACTTTCGACT TCAAGGACTT GTCTGTTGCA GCCGATGACG AAAACGTTAC TGTTAGCGTC
AAGGTCACCA ACACCGGTTC TGTAGATGGT TCTGAGACAG TTCAAGTCTA CATTGAACAA
TCTAACCCAA GTGTCATCAG ACCTGTCAAA GAATTGAAAG AATTCGGTAA GGTCTTCTTG
AAGGCTGGTG AAACGAAGTC TGTCGAAGTC AAGATCTCCA TCAAAGAGGC TACTTCTTAC
TGGAATGGTT ACTTTAGCAA ATGGGAATCC ACAAAAGATA CTTACAAGGT ATTGGTAGGT
AACAGTTCAG ACAACATTAT TGTTGAAGGT GAATTTGCTA CCTCCAAGAC TTTCTACTGG
TTGGGGTTGT AG
 
Protein sequence
MGAQELDIEY LIKELTLPEK ISLLAGKDFW HTFPIERLNI PSIRVSDGPN GIRGTKFFNS 
VPSNCFPCGT GLAATFNKDL WVEAGELMGK EAKMKGAHVI LGPTSNIVRS PLGGRAFESY
SEDPLLSGHA ASNIIKGIQN ENVVACLKHF VCNDQEDDRR GVDTLLTDRA LREIYLKPFQ
IALRDSEPGA LMTSYNKIRG IHVSESKELM QDILRDEYKY EGTTMSDWLG TNSTKAALDA
GVNLEMPGPA RFRTQLQVTH EIQSKRIHAQ TIDDNVRGVL KLINRALKAG IPDDVVESAN
EDPASSELLR KVGDESIVLL KNEGNILPLS KTSVAGQEKI AVIGPNVKAA QDSGGGSASL
TARYKVTPWE GIKKKIEEGG NTVSLEYSLG AFLDKNMPDV GDILENDKGE KGVTAKFYKT
APGTKDRQQF AERFLPTTKL CLFDFKDPEL APGEVLFYAD FEGYFTPEET ADYEFGASVM
GTAQVFVDGK LVVDNKTKQT KGDAFFLAMG TREERGTVHL EKGKKYHVKC EFGTAPTYTL
DPTQEIGGAF FGFRIDSPQE TELTKAIELA KSVDKVILVV GLSKEWESEG FDRSDMDIPG
ATNQLIEEVL KVNKNVVIVN QSGSPVTMPW AEKVPALVHA WYGGNELGNT IADVLFGDVN
PSGKLSMSFP KKLEDTPSYL NYGSINGQVW YGEDIFVGYR YYEKVKQDVL FPFGFGLSYT
TFDFKDLSVA ADDENVTVSV KVTNTGSVDG SETVQVYIEQ SNPSVIRPVK ELKEFGKVFL
KAGETKSVEV KISIKEATSY WNGYFSKWES TKDTYKVLVG NSSDNIIVEG EFATSKTFYW
LGL