| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40211 |
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| Symbol | RTA1.3 |
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| ID | 4851937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 3240629 |
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| End bp | 3241435 |
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| Gene Length | 807 bp |
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| Protein Length | 269 aa |
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| Translation table | |
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| GC content | 40% |
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| IMG OID | 640393645 |
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| Product | RTA protein |
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| Protein accession | XP_001387189 |
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| Protein GI | 126276073 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.147459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.195614 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACCA ACGAATGGAA ACTTTACAAC TACACCCCTC TGCTTTGGGT AAACCTAGTA
CAGGCTGGCA AATATGCTCT TCTACTTTCG GTTCTGATCG GTCTAATGAT TTTTGTAAAA
ATAAAATACA ACAAGTATTT GTCAAAACAA AAACTGAATA GATACCTAGG TGTTATGATT
CCTTTTACAA TTGGCTTGGC TATGGAATGT ATTGGCTATA TAGGAAGAGC AATGGGCCAT
TCTGACCCAC AAAATTTGGG TGCGTATATC CTTCAGTCTC TCTGTTTGTT ACTTGGTCCG
ACATTCATGG CTGCTTCCAT TTATATGCTT TTCGGAGAGA TCGTTAAAAC CTTAGACGCA
AGCCATCTTT CAATTATCCC AATAACGAAG CTCACTAAGA TCTTTGTGGC AGGCGATATC
CTTTCGTTAC TTTTGCAGAG TGGTGGAGGA GGATTGATGG CTCTGAGTTC TAAAGCAGAT
TTCGGTGAAA AACTTGTCAT TGGAGGCTTG ACAGTGCAGC TCATTTTCTT TGGTTGCTTT
ATGGTCTGCG TCGTACTCTT CTTCCTTAAG TGCTCCCGTT ACCCTACTAA GTTGGCAAAC
TTGTCAAGTT CCTTGAGCAG GTATATGAAC AACTGGAAGG TACATCTTTT GCTGTTGGTT
ATAGCTTCCT TGTTAATCTT TGCTAGATCA ATTTATCGTT TACTTGAATT TGTTGAAGGA
AGAGACGGAA AGCTAATGTC GTCAGAAGAG TACCTCTTTC TTCTCGATAG TCTTTTTATC
ACATTCGCCG CTCTTACTTT ATTGAGC
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| Protein sequence | MSTNEWKLYN YTPLLWVNLV QAGKYALLLS VLIGLMIFVK IKYNKYLSKQ KLNRYLGVMI
PFTIGLAMEC IGYIGRAMGH SDPQNLGAYI LQSLCLLLGP TFMAASIYML FGEIVKTLDA
SHLSIIPITK LTKIFVAGDI LSLLLQSGGG GLMALSSKAD FGEKLVIGGL TVQLIFFGCF
MVCVVLFFLK CSRYPTKLAN LSSSLSRYMN NWKVHLLLLV IASLLIFARS IYRLLEFVEG
RDGKLMSSEE YLFLLDSLFI TFAALTLLS
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