| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_40132 |
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| Symbol | MDHM |
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| ID | 4851577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 2191672 |
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| End bp | 2192685 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | 640393285 |
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| Product | NAD-dependent malate dehydrogenase |
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| Protein accession | XP_001387005 |
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| Protein GI | 126274913 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.019207 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAGG TCGCTGTTTT AGGTGCTGCC GGTGGTATCG GTCAGCCATT GTCGCTTTTG
TTGAAGTTAA ATCCCAACGT TGACGAGTTG TCGTTGTTTG ATGTCGTCAA TGTCCCAGGT
GTCGGTGCCG ACTTGTCCCA CATAAACTCG GACTCCACCA CCCAAGCTTT CGTGCCTTCT
TCTAAGGAAG ACAAGACCGC TTTGGCTTCT GCCTTGAAGG ACTCGGACTT GGTCATCATC
CCAGCAGGTA TCCCAAGAAA GCCAGGCATG ACCAGAGACG ACTTGTTCAA CATCAATGCC
TCCATCATCA AGGGCTTGGC CGAAGGAATT GCTGAATCGG CACCAAAGGC CTTTGTGTTG
GTTATCTCTA ACCCTGTAAA CTCCACCGTG CCAATTGTCG CTGAAACCTT GAAGCAAAAG
GGTGTCTACG ACCCAGCCAG ATTGTTTGGT GTCACCACCT TGGACATCGT CAGAGCCAAC
ACCTTCATCT CGCAATTGTA CCCTAAGGAA TCTAAGCCTT CTGACTTCAA CATCAACGTG
ATTGGTGGCC ACTCCGGTGA AACCATTGTG CCATTGTACT CGCTCACCAA CTCCAAGTCG
TACTACAACA AGTTGTCTGC AGACCAAAAG AAGGAATTGA TCCGCAGAGT GCAATTTGGT
GGTGACGAAG TCGTCCAAGC TAAGAATGGT GCTGGTTCCG CCACATTGTC TATGGCTTAC
GCTGGTTACA GATTGGCTGA ATCCATCTTG AAGTCGTTCA CCTCTTCTGA GGAAATTGTC
GAATGCACCT ACTTGAACTT GGATTCGTCC ATCAAGGGCG CCGATGAAGC CAAGAAGTTG
GTTGACGGCT TGGACTTCTT CTCCTTGCCT GTTGTCTTGT CCAAGAACGG TATTGCTGCT
GTTAAGTACG ACATCTTGAA CCAGATCAGT GACGAAGAAA AGCAATTGTT GGTTGTCGCC
AAGGATCAAT TGGCTAAGAA CATCGCCAAG GGTGTTGAGT TCGCTACCAA GTAA
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| Protein sequence | MVKVAVLGAA GGIGQPLSLL LKLNPNVDEL SLFDVVNVPG VGADLSHINS DSTTQAFVPS
SKEDKTALAS ALKDSDLVII PAGIPRKPGM TRDDLFNINA SIIKGLAEGI AESAPKAFVL
VISNPVNSTV PIVAETLKQK GVYDPARLFG VTTLDIVRAN TFISQLYPKE SKPSDFNINV
IGGHSGETIV PLYSLTNSKS YYNKLSADQK KELIRRVQFG GDEVVQAKNG AGSATLSMAY
AGYRLAESIL KSFTSSEEIV ECTYLNLDSS IKGADEAKKL VDGLDFFSLP VVLSKNGIAA
VKYDILNQIS DEEKQLLVVA KDQLAKNIAK GVEFATK
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