| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_39941 |
|---|
| Symbol | |
|---|
| ID | 4851870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009068 |
|---|
| Strand | + |
|---|
| Start bp | 3056190 |
|---|
| End bp | 3057131 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | |
|---|
| GC content | 41% |
|---|
| IMG OID | 640393578 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386914 |
|---|
| Protein GI | 126275861 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.454558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTGT CTGCTCCACA AATCAACACT AATCTCGTCA TCAAGCACAA GAAAGTCGAA
CTTTCTTCTG GTGCAAATGT CTTCTATCTC GAAGCAGGAG ACTCTTCCAA GCCTAACCTC
TTACTCTTGC ACGGTCTCCC ATCGTCCTCC AGACAGTACA AGGATCTCAT CATTCTTTTG
GCACCTTACT TCCATATTGT AGCTCCTGAT CTTCCAGGAT ACGGTCAAAC CACTGTTGCT
GATGATTTCG TCTTTTCGTT TGCTGGTTTT GCTGACACTA TCGACTTGTT CTTGGATACC
ATCAACTTTG ATAATTTTGC CCTCTATATC TTTGACTACG GTGCCCCTAC CGGGCTTAGA
ATTGCTATTA GAAAGACAAA GACAATTAAG GCTATCATTA CTCAAAATGG TAATGCCTAT
TTGGAAGGTA TCCAGCTGGA TTTCTGGACT AATTTCAAGA AGGCATGGAG TATTTTAGAT
ACTAAACACA AGACTGAAGA ACAGGAAAAG CAATTTAAAG AGCTCCTAAT TAGTTTCAAA
CAATTCTTGT CCACCACTCC TGGCTACACT TTCCAGTATG AAGATGGAGA ACCAGATTCT
ACCTTGGTAG ACCCAGAAGC TGGTCTTGTT GATTTTTATT TATTAACTAA CTTGCCCAAC
TCTGTTGATC ATCAAGTGGA GATTTTGCTT GATTACAGAA CAAACTTGGA CTTGTACCCT
GAATTCCAAA AGTTCTTCAA AGAAACTCAA ATCCCAATTC TTGCAGTCTG GGGTAAGAAC
GATCAGATCT TTACTGTTGA GGGAGCCCAT GCCTACAAGA AAGATTCCAA GAATGTCAAA
GTCGTTGAAA TTGATGCTGG GCACTTCGCT GTTTCTTCCC ATACGGTCGC TATTGCACAG
AATATTTTGG ACTTCTTCGC TGAGTACAAC TTATTGGGTT AG
|
|---|
| Protein sequence | MSLSAPQINT NLVIKHKKVE LSSGANVFYL EAGDSSKPNL LLLHGLPSSS RQYKDLIILL
APYFHIVAPD LPGYGQTTVA DDFVFSFAGF ADTIDLFLDT INFDNFALYI FDYGAPTGLR
IAIRKTKTIK AIITQNGNAY LEGIQLDFWT NFKKAWSILD TKHKTEEQEK QFKELLISFK
QFLSTTPGYT FQYEDGEPDS TLVDPEAGLV DFYLLTNLPN SVDHQVEILL DYRTNLDLYP
EFQKFFKETQ IPILAVWGKN DQIFTVEGAH AYKKDSKNVK VVEIDAGHFA VSSHTVAIAQ
NILDFFAEYN LLG
|
|---|
| |